Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.07■□□□□ 0.64
CCL2P13500 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL2P13500 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCL2P13500 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL2P13500 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL2P13500 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCL2P13500 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCL2P13500 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCL2P13500 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.06■□□□□ 0.64
CCL2P13500 OR2I1P-207ENST00000453522 948 ntBASIC19.06■□□□□ 0.64
CCL2P13500 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL2P13500 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.06■□□□□ 0.64
CCL2P13500 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL2P13500 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL2P13500 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCL2P13500 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCL2P13500 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CCL2P13500 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL2P13500 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.05■□□□□ 0.64
CCL2P13500 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCL2P13500 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL2P13500 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCL2P13500 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL2P13500 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.04■□□□□ 0.64
CCL2P13500 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCL2P13500 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL2P13500 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL2P13500 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL2P13500 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL2P13500 MIR638-201ENST00000385237 100 ntBASIC19.04■□□□□ 0.64
CCL2P13500 AL031432.3-201ENST00000607698 485 ntBASIC19.04■□□□□ 0.64
CCL2P13500 AL355001.2-201ENST00000620617 1191 ntBASIC19.04■□□□□ 0.64
CCL2P13500 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL2P13500 AC233723.2-201ENST00000623798 2106 ntBASIC19.04■□□□□ 0.64
CCL2P13500 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL2P13500 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCL2P13500 AC087742.1-201ENST00000575880 1738 ntBASIC19.03■□□□□ 0.64
CCL2P13500 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL2P13500 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCL2P13500 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL2P13500 EDA-201ENST00000338901 1233 ntBASIC19.03■□□□□ 0.64
CCL2P13500 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL2P13500 AP001330.3-201ENST00000520123 633 ntBASIC19.03■□□□□ 0.64
CCL2P13500 AF213884.3-201ENST00000563833 479 ntBASIC19.03■□□□□ 0.64
CCL2P13500 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL2P13500 AC005837.3-201ENST00000612163 286 ntBASIC19.03■□□□□ 0.64
CCL2P13500 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL2P13500 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.03■□□□□ 0.64
CCL2P13500 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL2P13500 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL2P13500 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL2P13500 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCL2P13500 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCL2P13500 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL2P13500 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.02■□□□□ 0.64
CCL2P13500 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL2P13500 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL2P13500 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCL2P13500 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.02■□□□□ 0.64
CCL2P13500 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.02■□□□□ 0.64
CCL2P13500 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCL2P13500 AC099791.1-201ENST00000416440 715 ntBASIC19.02■□□□□ 0.64
CCL2P13500 BX842568.3-201ENST00000418104 571 ntBASIC19.02■□□□□ 0.64
CCL2P13500 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCL2P13500 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.02■□□□□ 0.64
CCL2P13500 AC233992.3-201ENST00000607491 485 ntBASIC19.02■□□□□ 0.64
CCL2P13500 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL2P13500 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCL2P13500 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCL2P13500 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCL2P13500 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCL2P13500 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCL2P13500 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL2P13500 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCL2P13500 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCL2P13500 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL2P13500 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.01■□□□□ 0.63
CCL2P13500 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCL2P13500 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL2P13500 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL2P13500 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms