Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.42■□□□□ 0.54
TFF1P04155 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TFF1P04155 AC092171.4-201ENST00000609130 632 ntBASIC18.42■□□□□ 0.54
TFF1P04155 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TFF1P04155 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TFF1P04155 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TFF1P04155 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
TFF1P04155 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TFF1P04155 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TFF1P04155 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TFF1P04155 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TFF1P04155 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TFF1P04155 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.41■□□□□ 0.54
TFF1P04155 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.41■□□□□ 0.54
TFF1P04155 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.41■□□□□ 0.54
TFF1P04155 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.41■□□□□ 0.54
TFF1P04155 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TFF1P04155 MIR4767-201ENST00000582827 78 ntBASIC18.41■□□□□ 0.54
TFF1P04155 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
TFF1P04155 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TFF1P04155 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TFF1P04155 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TFF1P04155 AC080038.3-201ENST00000623346 1952 ntBASIC18.41■□□□□ 0.54
TFF1P04155 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TFF1P04155 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.4■□□□□ 0.54
TFF1P04155 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.4■□□□□ 0.54
TFF1P04155 PBX2P1-201ENST00000493219 1291 ntBASIC18.4■□□□□ 0.54
TFF1P04155 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.4■□□□□ 0.54
TFF1P04155 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.4■□□□□ 0.54
TFF1P04155 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TFF1P04155 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TFF1P04155 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TFF1P04155 GUSBP5-202ENST00000510805 1989 ntBASIC18.39■□□□□ 0.53
TFF1P04155 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TFF1P04155 SLC47A1P1-202ENST00000449666 945 ntBASIC18.39■□□□□ 0.53
TFF1P04155 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TFF1P04155 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.39■□□□□ 0.53
TFF1P04155 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.39■□□□□ 0.53
TFF1P04155 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TFF1P04155 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TFF1P04155 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.39■□□□□ 0.53
TFF1P04155 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TFF1P04155 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.39■□□□□ 0.53
TFF1P04155 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TFF1P04155 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TFF1P04155 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TFF1P04155 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TFF1P04155 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TFF1P04155 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TFF1P04155 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 DUX4L19-201ENST00000557448 1267 ntBASIC18.38■□□□□ 0.53
TFF1P04155 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TFF1P04155 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TFF1P04155 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TFF1P04155 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TFF1P04155 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TFF1P04155 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TFF1P04155 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TFF1P04155 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.37■□□□□ 0.53
TFF1P04155 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TFF1P04155 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TFF1P04155 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TFF1P04155 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TFF1P04155 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TFF1P04155 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.37■□□□□ 0.53
TFF1P04155 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TFF1P04155 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.37■□□□□ 0.53
TFF1P04155 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TFF1P04155 AC136469.2-201ENST00000623944 1028 ntBASIC18.37■□□□□ 0.53
TFF1P04155 AC135279.3-201ENST00000610945 1311 ntBASIC18.37■□□□□ 0.53
TFF1P04155 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TFF1P04155 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TFF1P04155 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TFF1P04155 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.36■□□□□ 0.53
TFF1P04155 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.36■□□□□ 0.53
TFF1P04155 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TFF1P04155 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TFF1P04155 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.36■□□□□ 0.53
TFF1P04155 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.36■□□□□ 0.53
TFF1P04155 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.36■□□□□ 0.53
TFF1P04155 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TFF1P04155 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms