Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D3FA6NER0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.9■■□□□ 1.1
TBC1D3FA6NER0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TBC1D3FA6NER0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.89■■□□□ 1.1
TBC1D3FA6NER0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TBC1D3FA6NER0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TBC1D3FA6NER0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.89■■□□□ 1.09
TBC1D3FA6NER0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.88■■□□□ 1.09
TBC1D3FA6NER0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 AC093323.1-202ENST00000635031 2045 ntBASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 ANOS2P-203ENST00000472227 1816 ntBASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.87■■□□□ 1.09
TBC1D3FA6NER0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 BX005040.4-201ENST00000637145 1518 ntBASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D3FA6NER0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
TBC1D3FA6NER0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 AC004911.1-201ENST00000416316 871 ntBASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 AC092437.1-201ENST00000624794 1048 ntBASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 RARRES2P11-201ENST00000635158 484 ntBASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
TBC1D3FA6NER0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TBC1D3FA6NER0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TBC1D3FA6NER0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TBC1D3FA6NER0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.83■■□□□ 1.09
TBC1D3FA6NER0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TBC1D3FA6NER0 SMUG1P1-201ENST00000590640 811 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms