Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.9■□□□□ 0.62
CSMD1Q96PZ7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 AC010331.1-201ENST00000611423 582 ntBASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.89■□□□□ 0.61
CSMD1Q96PZ7 UBE2DNL-204ENST00000602536 740 ntBASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 MIR1224-201ENST00000408193 85 ntBASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 AC211429.1-201ENST00000415277 523 ntBASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 DUX4L16-201ENST00000555130 1264 ntBASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 AC010525.1-201ENST00000585559 441 ntBASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSMD1Q96PZ7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 AC092803.2-201ENST00000564287 1899 ntBASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
CSMD1Q96PZ7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 BX005040.4-201ENST00000637145 1518 ntBASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CSMD1Q96PZ7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 AL022069.1-201ENST00000568025 1636 ntBASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CSMD1Q96PZ7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD1Q96PZ7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD1Q96PZ7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.84■□□□□ 0.61
CSMD1Q96PZ7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD1Q96PZ7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD1Q96PZ7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSMD1Q96PZ7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.84■□□□□ 0.61
CSMD1Q96PZ7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 CNN2P6-201ENST00000439038 900 ntBASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 AC008550.1-201ENST00000511500 884 ntBASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.83■□□□□ 0.61
CSMD1Q96PZ7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CSMD1Q96PZ7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CSMD1Q96PZ7 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.83■□□□□ 0.6
CSMD1Q96PZ7 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.83■□□□□ 0.6
CSMD1Q96PZ7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSMD1Q96PZ7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CSMD1Q96PZ7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 OR2I1P-207ENST00000453522 948 ntBASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSMD1Q96PZ7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms