Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 C9orf163-202ENST00000624034 2573 ntBASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3KBP1Q96B97 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 AC012676.1-201ENST00000574705 1949 ntBASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 AC133637.1-201ENST00000624115 1537 ntBASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3KBP1Q96B97 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.66■■□□□ 1.06
SH3KBP1Q96B97 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 IRS3P-201ENST00000223076 1006 ntBASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 AC126544.1-201ENST00000580842 1059 ntBASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3KBP1Q96B97 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SH3KBP1Q96B97 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SH3KBP1Q96B97 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SH3KBP1Q96B97 AC092068.2-201ENST00000590491 1708 ntBASIC21.64■■□□□ 1.06
SH3KBP1Q96B97 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SH3KBP1Q96B97 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3KBP1Q96B97 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3KBP1Q96B97 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 AL353803.4-201ENST00000565882 1934 ntBASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 RARRES2P6-201ENST00000567333 442 ntBASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3KBP1Q96B97 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SH3KBP1Q96B97 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms