Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNDC9Q8TBE3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNDC9Q8TBE3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNDC9Q8TBE3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
FNDC9Q8TBE3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNDC9Q8TBE3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.75■□□□□ 0.75
FNDC9Q8TBE3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FNDC9Q8TBE3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.75■□□□□ 0.75
FNDC9Q8TBE3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.75■□□□□ 0.75
FNDC9Q8TBE3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.75■□□□□ 0.75
FNDC9Q8TBE3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
FNDC9Q8TBE3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FNDC9Q8TBE3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 AC068473.5-201ENST00000616428 2072 ntBASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
FNDC9Q8TBE3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 TSPY26P-201ENST00000476365 1326 ntBASIC19.71■□□□□ 0.75
FNDC9Q8TBE3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FNDC9Q8TBE3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 IRS3P-201ENST00000223076 1006 ntBASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.69■□□□□ 0.74
FNDC9Q8TBE3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms