Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SIMC1Q8NDZ2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 MIR3181-201ENST00000578512 73 ntBASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SIMC1Q8NDZ2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SIMC1Q8NDZ2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.64■□□□□ 0.9
SIMC1Q8NDZ2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SIMC1Q8NDZ2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 AC008406.3-201ENST00000620001 1374 ntBASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIMC1Q8NDZ2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIMC1Q8NDZ2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIMC1Q8NDZ2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SIMC1Q8NDZ2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 AC233723.2-201ENST00000623798 2106 ntBASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 AC133637.1-201ENST00000624115 1537 ntBASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SIMC1Q8NDZ2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIMC1Q8NDZ2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms