Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LIMS2Q7Z4I7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.4■■□□□ 1.34
LIMS2Q7Z4I7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
LIMS2Q7Z4I7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LIMS2Q7Z4I7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 AC026271.2-201ENST00000428091 497 ntBASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 AC010141.3-201ENST00000456659 717 ntBASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LIMS2Q7Z4I7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LIMS2Q7Z4I7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 MIR935-201ENST00000401179 91 ntBASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
LIMS2Q7Z4I7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 AC012414.1-201ENST00000556676 535 ntBASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.34■■□□□ 1.33
LIMS2Q7Z4I7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 AL358852.1-201ENST00000623174 1268 ntBASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
LIMS2Q7Z4I7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
LIMS2Q7Z4I7 OXCT2P1-201ENST00000447263 1535 ntBASIC23.33■■□□□ 1.32
LIMS2Q7Z4I7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.33■■□□□ 1.32
LIMS2Q7Z4I7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.33■■□□□ 1.32
LIMS2Q7Z4I7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 LINC01960-201ENST00000563759 1884 ntBASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LIMS2Q7Z4I7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 RARRES2P6-201ENST00000567333 442 ntBASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.31■■□□□ 1.32
LIMS2Q7Z4I7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 AC087742.1-201ENST00000575880 1738 ntBASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms