Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TM4SF20Q53R12 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 AC099791.2-201ENST00000605725 427 ntBASIC17.03■□□□□ 0.32
TM4SF20Q53R12 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.03■□□□□ 0.32
TM4SF20Q53R12 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF20Q53R12 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF20Q53R12 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF20Q53R12 AL136116.3-201ENST00000402907 1138 ntBASIC17.02■□□□□ 0.32
TM4SF20Q53R12 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.02■□□□□ 0.32
TM4SF20Q53R12 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF20Q53R12 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM4SF20Q53R12 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.02■□□□□ 0.32
TM4SF20Q53R12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TM4SF20Q53R12 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM4SF20Q53R12 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.02■□□□□ 0.31
TM4SF20Q53R12 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 DUX4L4-201ENST00000566884 1269 ntBASIC17.01■□□□□ 0.31
TM4SF20Q53R12 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 AC241377.3-202ENST00000626088 1088 ntBASIC17.01■□□□□ 0.31
TM4SF20Q53R12 AC241585.3-202ENST00000628937 1088 ntBASIC17.01■□□□□ 0.31
TM4SF20Q53R12 AC245100.8-202ENST00000629247 1058 ntBASIC17.01■□□□□ 0.31
TM4SF20Q53R12 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM4SF20Q53R12 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 AC009086.3-201ENST00000623486 1008 ntBASIC17■□□□□ 0.31
TM4SF20Q53R12 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17■□□□□ 0.31
TM4SF20Q53R12 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
TM4SF20Q53R12 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17■□□□□ 0.31
TM4SF20Q53R12 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM4SF20Q53R12 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 AC006455.2-201ENST00000429931 906 ntBASIC16.99■□□□□ 0.31
TM4SF20Q53R12 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.99■□□□□ 0.31
TM4SF20Q53R12 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.99■□□□□ 0.31
TM4SF20Q53R12 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TM4SF20Q53R12 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TM4SF20Q53R12 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TM4SF20Q53R12 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms