Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMC4P56277 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CMC4P56277 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CMC4P56277 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CMC4P56277 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CMC4P56277 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.37■□□□□ 0.21
CMC4P56277 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.37■□□□□ 0.21
CMC4P56277 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CMC4P56277 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CMC4P56277 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CMC4P56277 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CMC4P56277 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CMC4P56277 MIR638-201ENST00000385237 100 ntBASIC16.37■□□□□ 0.21
CMC4P56277 AC008764.7-201ENST00000593779 1081 ntBASIC16.37■□□□□ 0.21
CMC4P56277 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CMC4P56277 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.37■□□□□ 0.21
CMC4P56277 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CMC4P56277 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CMC4P56277 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CMC4P56277 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CMC4P56277 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.36■□□□□ 0.21
CMC4P56277 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.36■□□□□ 0.21
CMC4P56277 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CMC4P56277 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CMC4P56277 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CMC4P56277 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.36■□□□□ 0.21
CMC4P56277 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.36■□□□□ 0.21
CMC4P56277 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.36■□□□□ 0.21
CMC4P56277 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CMC4P56277 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CMC4P56277 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.35■□□□□ 0.21
CMC4P56277 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.35■□□□□ 0.21
CMC4P56277 SUDS3P1-201ENST00000505831 966 ntBASIC16.35■□□□□ 0.21
CMC4P56277 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CMC4P56277 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CMC4P56277 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.35■□□□□ 0.21
CMC4P56277 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.35■□□□□ 0.21
CMC4P56277 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.35■□□□□ 0.21
CMC4P56277 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CMC4P56277 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CMC4P56277 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMC4P56277 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.34■□□□□ 0.21
CMC4P56277 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMC4P56277 MIR939-201ENST00000401314 82 ntBASIC16.34■□□□□ 0.21
CMC4P56277 AC099791.1-201ENST00000416440 715 ntBASIC16.34■□□□□ 0.21
CMC4P56277 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.34■□□□□ 0.21
CMC4P56277 SLC47A1P1-202ENST00000449666 945 ntBASIC16.34■□□□□ 0.21
CMC4P56277 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CMC4P56277 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.34■□□□□ 0.21
CMC4P56277 AF213884.3-201ENST00000563833 479 ntBASIC16.34■□□□□ 0.21
CMC4P56277 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.34■□□□□ 0.21
CMC4P56277 AL136967.2-201ENST00000623968 743 ntBASIC16.34■□□□□ 0.21
CMC4P56277 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.34■□□□□ 0.21
CMC4P56277 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CMC4P56277 ESRRAP2-201ENST00000418437 1549 ntBASIC16.34■□□□□ 0.21
CMC4P56277 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CMC4P56277 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CMC4P56277 AC010141.3-201ENST00000456659 717 ntBASIC16.33■□□□□ 0.2
CMC4P56277 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.33■□□□□ 0.2
CMC4P56277 AP001330.3-201ENST00000520123 633 ntBASIC16.33■□□□□ 0.2
CMC4P56277 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.33■□□□□ 0.2
CMC4P56277 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CMC4P56277 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMC4P56277 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CMC4P56277 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMC4P56277 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.33■□□□□ 0.2
CMC4P56277 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.33■□□□□ 0.2
CMC4P56277 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.33■□□□□ 0.2
CMC4P56277 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CMC4P56277 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CMC4P56277 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CMC4P56277 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.32■□□□□ 0.2
CMC4P56277 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CMC4P56277 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CMC4P56277 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms