Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 MIR3621-201ENST00000580529 85 ntBASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC241377.3-202ENST00000626088 1088 ntBASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC241585.3-202ENST00000628937 1088 ntBASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC245100.8-202ENST00000629247 1058 ntBASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
SAA2-SAA4A0A096LPE2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC080038.3-201ENST00000623346 1952 ntBASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AL356441.2-201ENST00000443009 864 ntBASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AL499627.2-201ENST00000606283 725 ntBASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.93■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC139530.1-201ENST00000575312 1977 ntBASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SAA2-SAA4A0A096LPE2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC006455.2-201ENST00000429931 906 ntBASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AC099791.2-201ENST00000605725 427 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms