Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXJ3Q9UPW0 AC087742.1-201ENST00000575880 1738 ntBASIC19.23■□□□□ 0.67
FOXJ3Q9UPW0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXJ3Q9UPW0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXJ3Q9UPW0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXJ3Q9UPW0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXJ3Q9UPW0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXJ3Q9UPW0 AC080038.3-201ENST00000623346 1952 ntBASIC19.23■□□□□ 0.67
FOXJ3Q9UPW0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 AL451085.2-201ENST00000605085 799 ntBASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXJ3Q9UPW0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXJ3Q9UPW0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXJ3Q9UPW0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 AL035685.1-201ENST00000636663 812 ntBASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXJ3Q9UPW0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXJ3Q9UPW0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXJ3Q9UPW0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXJ3Q9UPW0 PVT1_1.1-201ENST00000615125 194 ntBASIC19.17■□□□□ 0.66
FOXJ3Q9UPW0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXJ3Q9UPW0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
FOXJ3Q9UPW0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXJ3Q9UPW0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXJ3Q9UPW0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXJ3Q9UPW0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXJ3Q9UPW0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXJ3Q9UPW0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXJ3Q9UPW0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXJ3Q9UPW0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms