Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.39■□□□□ 0.38
TTC9CQ8N5M4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.39■□□□□ 0.38
TTC9CQ8N5M4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TTC9CQ8N5M4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 AL512631.2-201ENST00000604634 923 ntBASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TTC9CQ8N5M4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 SRD5A1P1-201ENST00000442297 786 ntBASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 AC092171.4-201ENST00000609130 632 ntBASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TTC9CQ8N5M4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.37■□□□□ 0.37
TTC9CQ8N5M4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 AC099791.2-201ENST00000605725 427 ntBASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 AC004687.1-201ENST00000579003 1625 ntBASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC9CQ8N5M4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 AL117328.2-201ENST00000624617 1940 ntBASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9CQ8N5M4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9CQ8N5M4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms