Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.46■□□□□ 0.71
ODF4Q2M2E3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ODF4Q2M2E3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ODF4Q2M2E3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.46■□□□□ 0.71
ODF4Q2M2E3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.46■□□□□ 0.71
ODF4Q2M2E3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ODF4Q2M2E3 AC007375.3-201ENST00000600936 2314 ntBASIC19.45■□□□□ 0.7
ODF4Q2M2E3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ODF4Q2M2E3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ODF4Q2M2E3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 AC144652.1-201ENST00000609974 1624 ntBASIC19.43■□□□□ 0.7
ODF4Q2M2E3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
ODF4Q2M2E3 AC080038.3-201ENST00000623346 1952 ntBASIC19.43■□□□□ 0.7
ODF4Q2M2E3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ODF4Q2M2E3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ODF4Q2M2E3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ODF4Q2M2E3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ODF4Q2M2E3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ODF4Q2M2E3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 AC139530.1-201ENST00000575312 1977 ntBASIC19.39■□□□□ 0.69
ODF4Q2M2E3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ODF4Q2M2E3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ODF4Q2M2E3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms