Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
FOXN3O00409 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
FOXN3O00409 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.67■■□□□ 1.38
FOXN3O00409 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.67■■□□□ 1.38
FOXN3O00409 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
FOXN3O00409 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.66■■□□□ 1.38
FOXN3O00409 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXN3O00409 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXN3O00409 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.66■■□□□ 1.38
FOXN3O00409 AL499627.2-201ENST00000606283 725 ntBASIC23.66■■□□□ 1.38
FOXN3O00409 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.66■■□□□ 1.38
FOXN3O00409 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
FOXN3O00409 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.66■■□□□ 1.38
FOXN3O00409 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
FOXN3O00409 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXN3O00409 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
FOXN3O00409 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN3O00409 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN3O00409 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN3O00409 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.65■■□□□ 1.38
FOXN3O00409 LINC00526-201ENST00000581067 1875 ntBASIC23.65■■□□□ 1.38
FOXN3O00409 AC241377.3-202ENST00000626088 1088 ntBASIC23.65■■□□□ 1.38
FOXN3O00409 AC241585.3-202ENST00000628937 1088 ntBASIC23.65■■□□□ 1.38
FOXN3O00409 AC245100.8-202ENST00000629247 1058 ntBASIC23.65■■□□□ 1.38
FOXN3O00409 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN3O00409 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN3O00409 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
FOXN3O00409 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN3O00409 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN3O00409 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN3O00409 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN3O00409 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.64■■□□□ 1.38
FOXN3O00409 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN3O00409 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN3O00409 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.64■■□□□ 1.37
FOXN3O00409 AC006455.2-201ENST00000429931 906 ntBASIC23.64■■□□□ 1.37
FOXN3O00409 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
FOXN3O00409 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.64■■□□□ 1.37
FOXN3O00409 AL512631.2-201ENST00000604634 923 ntBASIC23.64■■□□□ 1.37
FOXN3O00409 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.64■■□□□ 1.37
FOXN3O00409 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXN3O00409 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
FOXN3O00409 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.64■■□□□ 1.37
FOXN3O00409 AC242852.2-201ENST00000615738 1807 ntBASIC23.63■■□□□ 1.37
FOXN3O00409 AC080038.3-201ENST00000623346 1952 ntBASIC23.63■■□□□ 1.37
FOXN3O00409 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.63■■□□□ 1.37
FOXN3O00409 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
FOXN3O00409 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN3O00409 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
FOXN3O00409 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN3O00409 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.63■■□□□ 1.37
FOXN3O00409 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.63■■□□□ 1.37
FOXN3O00409 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
FOXN3O00409 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN3O00409 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN3O00409 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN3O00409 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.62■■□□□ 1.37
FOXN3O00409 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN3O00409 AC099791.2-201ENST00000605725 427 ntBASIC23.62■■□□□ 1.37
FOXN3O00409 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.62■■□□□ 1.37
FOXN3O00409 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
FOXN3O00409 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
FOXN3O00409 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
FOXN3O00409 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
FOXN3O00409 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXN3O00409 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 LINC01960-201ENST00000563759 1884 ntBASIC23.61■■□□□ 1.37
FOXN3O00409 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXN3O00409 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN3O00409 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.6■■□□□ 1.37
FOXN3O00409 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.6■■□□□ 1.37
FOXN3O00409 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.6■■□□□ 1.37
FOXN3O00409 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.6■■□□□ 1.37
FOXN3O00409 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.6■■□□□ 1.37
FOXN3O00409 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN3O00409 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN3O00409 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
FOXN3O00409 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN3O00409 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN3O00409 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN3O00409 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms