Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM56Q96MV1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TMEM56Q96MV1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM56Q96MV1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM56Q96MV1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 AC087742.1-201ENST00000575880 1738 ntBASIC18.19■□□□□ 0.5
TMEM56Q96MV1 NTF6A-201ENST00000591175 560 ntBASIC18.19■□□□□ 0.5
TMEM56Q96MV1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 FBXW4P1-201ENST00000426721 2239 ntBASIC18.19■□□□□ 0.5
TMEM56Q96MV1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM56Q96MV1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 BHLHE23-202ENST00000612929 1109 ntBASIC18.18■□□□□ 0.5
TMEM56Q96MV1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM56Q96MV1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM56Q96MV1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 DUX4L18-201ENST00000553347 1267 ntBASIC18.16■□□□□ 0.5
TMEM56Q96MV1 AC074183.2-201ENST00000623112 922 ntBASIC18.16■□□□□ 0.5
TMEM56Q96MV1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM56Q96MV1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TMEM56Q96MV1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM56Q96MV1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TMEM56Q96MV1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM56Q96MV1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM56Q96MV1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms