Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 C1orf229-201ENST00000623686 2258 ntBASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TTC9CQ8N5M4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 ESRRAP2-201ENST00000418437 1549 ntBASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TTC9CQ8N5M4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC9CQ8N5M4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TTC9CQ8N5M4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TTC9CQ8N5M4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC9CQ8N5M4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TTC9CQ8N5M4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC9CQ8N5M4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TTC9CQ8N5M4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.43■□□□□ 0.38
TTC9CQ8N5M4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.42■□□□□ 0.38
TTC9CQ8N5M4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 AL499627.2-201ENST00000606283 725 ntBASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TTC9CQ8N5M4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 AC233723.2-201ENST00000623798 2106 ntBASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.4■□□□□ 0.38
TTC9CQ8N5M4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms