Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.51■■□□□ 1.51
COL1A2P08123 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.51■■□□□ 1.51
COL1A2P08123 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.51■■□□□ 1.51
COL1A2P08123 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A2P08123 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
COL1A2P08123 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A2P08123 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
COL1A2P08123 AC123595.1-201ENST00000440769 1046 ntBASIC24.5■■□□□ 1.51
COL1A2P08123 AL162430.1-201ENST00000480705 870 ntBASIC24.5■■□□□ 1.51
COL1A2P08123 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A2P08123 AC068587.7-201ENST00000641602 218 ntBASIC24.5■■□□□ 1.51
COL1A2P08123 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A2P08123 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL1A2P08123 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A2P08123 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
COL1A2P08123 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A2P08123 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
COL1A2P08123 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A2P08123 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
COL1A2P08123 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A2P08123 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A2P08123 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL1A2P08123 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A2P08123 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A2P08123 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A2P08123 AC034268.1-201ENST00000441047 882 ntBASIC24.48■■□□□ 1.51
COL1A2P08123 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.48■■□□□ 1.51
COL1A2P08123 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL1A2P08123 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
COL1A2P08123 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 AC092666.2-201ENST00000613287 246 ntBASIC24.47■■□□□ 1.51
COL1A2P08123 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.47■■□□□ 1.51
COL1A2P08123 MIR6084-201ENST00000622012 110 ntBASIC24.47■■□□□ 1.51
COL1A2P08123 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL1A2P08123 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
COL1A2P08123 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A2P08123 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A2P08123 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.46■■□□□ 1.51
COL1A2P08123 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.46■■□□□ 1.51
COL1A2P08123 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.46■■□□□ 1.51
COL1A2P08123 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A2P08123 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.46■■□□□ 1.51
COL1A2P08123 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
COL1A2P08123 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL1A2P08123 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
COL1A2P08123 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.45■■□□□ 1.5
COL1A2P08123 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.45■■□□□ 1.5
COL1A2P08123 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.45■■□□□ 1.5
COL1A2P08123 AL031602.1-201ENST00000633169 911 ntBASIC24.45■■□□□ 1.5
COL1A2P08123 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL1A2P08123 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.45■■□□□ 1.5
COL1A2P08123 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.45■■□□□ 1.5
COL1A2P08123 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.45■■□□□ 1.5
COL1A2P08123 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL1A2P08123 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.44■■□□□ 1.5
COL1A2P08123 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COL1A2P08123 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COL1A2P08123 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.44■■□□□ 1.5
COL1A2P08123 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.44■■□□□ 1.5
COL1A2P08123 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL1A2P08123 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.44■■□□□ 1.5
COL1A2P08123 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.44■■□□□ 1.5
COL1A2P08123 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL1A2P08123 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL1A2P08123 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL1A2P08123 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.43■■□□□ 1.5
COL1A2P08123 AC105233.4-201ENST00000642045 216 ntBASIC24.43■■□□□ 1.5
COL1A2P08123 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL1A2P08123 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.43■■□□□ 1.5
COL1A2P08123 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.43■■□□□ 1.5
COL1A2P08123 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.43■■□□□ 1.5
COL1A2P08123 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL1A2P08123 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL1A2P08123 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL1A2P08123 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL1A2P08123 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL1A2P08123 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.42■■□□□ 1.5
COL1A2P08123 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL1A2P08123 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL1A2P08123 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.42■■□□□ 1.5
COL1A2P08123 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL1A2P08123 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.42■■□□□ 1.5
COL1A2P08123 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.42■■□□□ 1.5
COL1A2P08123 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.42■■□□□ 1.5
COL1A2P08123 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL1A2P08123 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.42■■□□□ 1.5
COL1A2P08123 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.42■■□□□ 1.5
COL1A2P08123 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.41■■□□□ 1.5
COL1A2P08123 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL1A2P08123 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL1A2P08123 AC092068.2-201ENST00000590491 1708 ntBASIC24.41■■□□□ 1.5
COL1A2P08123 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms