Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NSUN3Q9H649 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NSUN3Q9H649 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NSUN3Q9H649 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.71■■□□□ 1.39
NSUN3Q9H649 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
NSUN3Q9H649 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
NSUN3Q9H649 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.7■■□□□ 1.38
NSUN3Q9H649 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.7■■□□□ 1.38
NSUN3Q9H649 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NSUN3Q9H649 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.7■■□□□ 1.38
NSUN3Q9H649 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.7■■□□□ 1.38
NSUN3Q9H649 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NSUN3Q9H649 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NSUN3Q9H649 ESRRAP2-201ENST00000418437 1549 ntBASIC23.69■■□□□ 1.38
NSUN3Q9H649 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NSUN3Q9H649 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NSUN3Q9H649 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.69■■□□□ 1.38
NSUN3Q9H649 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.69■■□□□ 1.38
NSUN3Q9H649 AC006970.2-201ENST00000450065 779 ntBASIC23.69■■□□□ 1.38
NSUN3Q9H649 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NSUN3Q9H649 BID-214ENST00000617586 542 ntTSL 5 BASIC23.69■■□□□ 1.38
NSUN3Q9H649 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.69■■□□□ 1.38
NSUN3Q9H649 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.69■■□□□ 1.38
NSUN3Q9H649 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NSUN3Q9H649 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NSUN3Q9H649 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.69■■□□□ 1.38
NSUN3Q9H649 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 AL355802.2-201ENST00000402069 882 ntBASIC23.68■■□□□ 1.38
NSUN3Q9H649 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.68■■□□□ 1.38
NSUN3Q9H649 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
NSUN3Q9H649 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
NSUN3Q9H649 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NSUN3Q9H649 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 AL109923.1-201ENST00000618799 583 ntBASIC23.67■■□□□ 1.38
NSUN3Q9H649 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.67■■□□□ 1.38
NSUN3Q9H649 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NSUN3Q9H649 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NSUN3Q9H649 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NSUN3Q9H649 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NSUN3Q9H649 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NSUN3Q9H649 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NSUN3Q9H649 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.66■■□□□ 1.38
NSUN3Q9H649 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.65■■□□□ 1.38
NSUN3Q9H649 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NSUN3Q9H649 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NSUN3Q9H649 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.65■■□□□ 1.38
NSUN3Q9H649 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.65■■□□□ 1.38
NSUN3Q9H649 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.65■■□□□ 1.38
NSUN3Q9H649 TMEM191A-211ENST00000637163 1067 ntBASIC23.65■■□□□ 1.38
NSUN3Q9H649 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.65■■□□□ 1.38
NSUN3Q9H649 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NSUN3Q9H649 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NSUN3Q9H649 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NSUN3Q9H649 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NSUN3Q9H649 AC020928.2-201ENST00000588717 2197 ntBASIC23.64■■□□□ 1.38
NSUN3Q9H649 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.64■■□□□ 1.38
NSUN3Q9H649 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.64■■□□□ 1.37
NSUN3Q9H649 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NSUN3Q9H649 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.64■■□□□ 1.37
NSUN3Q9H649 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.64■■□□□ 1.37
NSUN3Q9H649 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.64■■□□□ 1.37
NSUN3Q9H649 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
NSUN3Q9H649 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.64■■□□□ 1.37
NSUN3Q9H649 HLA-L-211ENST00000482052 1765 ntBASIC23.64■■□□□ 1.37
NSUN3Q9H649 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NSUN3Q9H649 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NSUN3Q9H649 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NSUN3Q9H649 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms