Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
VCX3BQ9H321 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VCX3BQ9H321 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
VCX3BQ9H321 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
VCX3BQ9H321 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.13■□□□□ 0.97
VCX3BQ9H321 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.13■□□□□ 0.97
VCX3BQ9H321 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VCX3BQ9H321 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VCX3BQ9H321 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.12■□□□□ 0.97
VCX3BQ9H321 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.12■□□□□ 0.97
VCX3BQ9H321 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VCX3BQ9H321 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VCX3BQ9H321 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.12■□□□□ 0.97
VCX3BQ9H321 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.12■□□□□ 0.97
VCX3BQ9H321 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VCX3BQ9H321 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VCX3BQ9H321 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VCX3BQ9H321 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VCX3BQ9H321 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VCX3BQ9H321 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.11■□□□□ 0.97
VCX3BQ9H321 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VCX3BQ9H321 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VCX3BQ9H321 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.1■□□□□ 0.97
VCX3BQ9H321 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VCX3BQ9H321 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
VCX3BQ9H321 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCX3BQ9H321 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
VCX3BQ9H321 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
VCX3BQ9H321 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCX3BQ9H321 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCX3BQ9H321 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.09■□□□□ 0.97
VCX3BQ9H321 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCX3BQ9H321 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCX3BQ9H321 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
VCX3BQ9H321 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
VCX3BQ9H321 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
VCX3BQ9H321 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VCX3BQ9H321 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
VCX3BQ9H321 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCX3BQ9H321 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCX3BQ9H321 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCX3BQ9H321 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.08■□□□□ 0.97
VCX3BQ9H321 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCX3BQ9H321 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCX3BQ9H321 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
VCX3BQ9H321 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VCX3BQ9H321 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.08■□□□□ 0.97
VCX3BQ9H321 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VCX3BQ9H321 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
VCX3BQ9H321 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VCX3BQ9H321 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VCX3BQ9H321 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
VCX3BQ9H321 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.07■□□□□ 0.96
VCX3BQ9H321 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.07■□□□□ 0.96
VCX3BQ9H321 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.07■□□□□ 0.96
VCX3BQ9H321 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VCX3BQ9H321 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VCX3BQ9H321 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VCX3BQ9H321 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms