Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SNRNP25Q9BV90 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SNRNP25Q9BV90 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SNRNP25Q9BV90 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
SNRNP25Q9BV90 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.07■■□□□ 1.28
SNRNP25Q9BV90 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.06■■□□□ 1.28
SNRNP25Q9BV90 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 AC009086.3-201ENST00000623486 1008 ntBASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SNRNP25Q9BV90 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SNRNP25Q9BV90 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 AC006455.2-201ENST00000429931 906 ntBASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
SNRNP25Q9BV90 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 AC131281.2-201ENST00000520478 145 ntBASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 AC099791.2-201ENST00000605725 427 ntBASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 MIR4466-201ENST00000606121 54 ntBASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 AC241377.3-202ENST00000626088 1088 ntBASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 AC241585.3-202ENST00000628937 1088 ntBASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 AC245100.8-202ENST00000629247 1058 ntBASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SNRNP25Q9BV90 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SNRNP25Q9BV90 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms