Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC01555Q8NAE3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 AC136469.2-201ENST00000623944 1028 ntBASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 AC133637.1-201ENST00000624115 1537 ntBASIC21.49■■□□□ 1.03
LINC01555Q8NAE3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 MIR4767-201ENST00000582827 78 ntBASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 DUSP8P5-201ENST00000422884 1815 ntBASIC21.48■■□□□ 1.03
LINC01555Q8NAE3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 MIR638-201ENST00000385237 100 ntBASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC01555Q8NAE3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC01555Q8NAE3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 AL031432.3-201ENST00000607698 485 ntBASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC01555Q8NAE3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 AC133561.4-201ENST00000566112 224 ntBASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 AC004687.1-201ENST00000579003 1625 ntBASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC01555Q8NAE3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
LINC01555Q8NAE3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC01555Q8NAE3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC01555Q8NAE3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC01555Q8NAE3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms