Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.532e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.172e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.152e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-219ENST00000593101 578 ntTSL 415.9■□□□□ 0.142e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.132e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-208ENST00000589126 625 ntTSL 515.22■□□□□ 0.032e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-218ENST00000593053 588 ntTSL 515.02■□□□□ -02e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.112e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.162e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.7□□□□□ -0.222e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.222e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-220ENST00000593104 545 ntTSL 413.55□□□□□ -0.242e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-207ENST00000588269 557 ntTSL 513.55□□□□□ -0.242e-8■■□□□ 11.7
PHF6Q8IWS0 PRKCSH-206ENST00000587509 545 ntTSL 413.05□□□□□ -0.322e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.422e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.22□□□□□ -0.452e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC11.84□□□□□ -0.512e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.542e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC11.36□□□□□ -0.592e-8■■□□□ 11.7
PHF6Q8IWS0 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC11.19□□□□□ -0.622e-8■■□□□ 11.7
PHF6Q8IWS0 RPL4-207ENST00000564647 1110 ntTSL 29.12□□□□□ -0.951e-34■■□□□ 11.7
PHF6Q8IWS0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.475e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.475e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-215ENST00000523922 493 ntTSL 326.76■■□□□ 1.875e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-210ENST00000520454 488 ntTSL 322.33■■□□□ 1.175e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.11■■□□□ 1.135e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.33■□□□□ 0.685e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.055e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.385e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-208ENST00000519916 597 ntTSL 211.19□□□□□ -0.625e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.335e-6■■□□□ 11.6
PHF6Q8IWS0 ZNF706-214ENST00000523146 476 ntTSL 54.76□□□□□ -1.655e-6■■□□□ 11.6
PHF6Q8IWS0 PHB2-208ENST00000543465 1518 ntTSL 523.77■■□□□ 1.43e-35■■□□□ 11.6
PHF6Q8IWS0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.29■■□□□ 1.323e-35■■□□□ 11.6
PHF6Q8IWS0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.44■■□□□ 1.183e-35■■□□□ 11.6
PHF6Q8IWS0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.113e-35■■□□□ 11.6
PHF6Q8IWS0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.36■□□□□ 0.853e-35■■□□□ 11.6
PHF6Q8IWS0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.843e-35■■□□□ 11.6
PHF6Q8IWS0 PHB2-205ENST00000537646 874 ntTSL 518.44■□□□□ 0.543e-35■■□□□ 11.6
PHF6Q8IWS0 SCARNA12-201ENST00000459155 270 ntBASIC15.49■□□□□ 0.073e-35■■□□□ 11.6
PHF6Q8IWS0 PHB2-212ENST00000545555 309 ntTSL 510.17□□□□□ -0.783e-35■■□□□ 11.6
PHF6Q8IWS0 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.364e-39■■□□□ 11.6
PHF6Q8IWS0 SCARNA7-201ENST00000458797 330 ntBASIC12.18□□□□□ -0.464e-39■■□□□ 11.6
PHF6Q8IWS0 KPNA4-203ENST00000483437 510 ntTSL 57.08□□□□□ -1.284e-39■■□□□ 11.6
PHF6Q8IWS0 HMGN2-205ENST00000466194 952 ntTSL 220.51■□□□□ 0.872e-35■■□□□ 11.6
PHF6Q8IWS0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.19■□□□□ 0.989e-12■■□□□ 11.5
PHF6Q8IWS0 TLE3-217ENST00000559574 325 ntTSL 520.94■□□□□ 0.949e-12■■□□□ 11.5
PHF6Q8IWS0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.22■□□□□ 0.519e-12■■□□□ 11.5
PHF6Q8IWS0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.469e-12■■□□□ 11.5
PHF6Q8IWS0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.399e-12■■□□□ 11.5
PHF6Q8IWS0 TLE3-225ENST00000561453 3719 ntTSL 513.64□□□□□ -0.239e-12■■□□□ 11.5
PHF6Q8IWS0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.319e-12■■□□□ 11.5
PHF6Q8IWS0 SNORA78-201ENST00000459373 127 ntBASIC23.06■■□□□ 1.285e-30■■□□□ 11.5
PHF6Q8IWS0 SNHG9-202ENST00000564014 471 ntBASIC19.77■□□□□ 0.765e-30■■□□□ 11.5
PHF6Q8IWS0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.35■□□□□ 0.375e-30■■□□□ 11.5
PHF6Q8IWS0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.55■■■□□ 22e-7■■□□□ 11.5
PHF6Q8IWS0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.55■■■□□ 22e-7■■□□□ 11.5
PHF6Q8IWS0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.87■■□□□ 1.732e-7■■□□□ 11.5
PHF6Q8IWS0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.262e-7■■□□□ 11.5
PHF6Q8IWS0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.56■■□□□ 1.22e-7■■□□□ 11.5
PHF6Q8IWS0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.182e-7■■□□□ 11.5
PHF6Q8IWS0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.28■■■□□ 2.761e-6■■□□□ 11.5
PHF6Q8IWS0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32■■■□□ 2.711e-6■■□□□ 11.5
PHF6Q8IWS0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32■■■□□ 2.711e-6■■□□□ 11.5
PHF6Q8IWS0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32■■■□□ 2.711e-6■■□□□ 11.5
PHF6Q8IWS0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.93■■□□□ 1.11e-6■■□□□ 11.5
PHF6Q8IWS0 RBBP6-211ENST00000568316 556 ntTSL 526.15■■□□□ 1.783e-8■■□□□ 11.4
PHF6Q8IWS0 RBBP6-210ENST00000568015 695 ntTSL 317.79■□□□□ 0.443e-8■■□□□ 11.4
PHF6Q8IWS0 ACTB-213ENST00000493945 1236 ntTSL 515.36■□□□□ 0.052e-19■■□□□ 11.4
PHF6Q8IWS0 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.863e-8■■□□□ 11.4
PHF6Q8IWS0 RBBP6-209ENST00000567686 1138 ntTSL 57.71□□□□□ -1.183e-8■■□□□ 11.4
PHF6Q8IWS0 RBBP6-207ENST00000564314 3361 ntTSL 27.68□□□□□ -1.183e-8■■□□□ 11.4
PHF6Q8IWS0 TMEM74B-203ENST00000481747 582 ntTSL 231.29■■■□□ 2.62e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-201ENST00000466684 1417 ntTSL 219.51■□□□□ 0.714e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.714e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-212ENST00000495265 2843 ntTSL 216.84■□□□□ 0.294e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-218ENST00000519838 396 ntTSL 216■□□□□ 0.154e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-208ENST00000489816 3170 ntTSL 1 (best)15.03■□□□□ -04e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-213ENST00000495794 4865 ntTSL 213.33□□□□□ -0.284e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-203ENST00000475706 744 ntTSL 1 (best)12.83□□□□□ -0.364e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC12.1□□□□□ -0.474e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-209ENST00000490814 3477 ntTSL 1 (best)10.26□□□□□ -0.774e-6■■□□□ 11.4
PHF6Q8IWS0 BRD9-211ENST00000494422 449 ntTSL 36.67□□□□□ -1.344e-6■■□□□ 11.4
PHF6Q8IWS0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.074e-10■□□□□ 11.3
PHF6Q8IWS0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.986e-7■□□□□ 11.3
PHF6Q8IWS0 NFE2L2-205ENST00000430047 451 ntTSL 325.37■■□□□ 1.656e-7■□□□□ 11.3
PHF6Q8IWS0 MFGE8-212ENST00000559997 531 ntTSL 521.22■□□□□ 0.996e-7■□□□□ 11.3
PHF6Q8IWS0 MFGE8-207ENST00000558352 1031 ntTSL 221.22■□□□□ 0.996e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-217ENST00000568209 266 ntTSL 519.47■□□□□ 0.716e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-208ENST00000473256 1771 ntTSL 219.42■□□□□ 0.76e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-216ENST00000567383 538 ntTSL 419.01■□□□□ 0.636e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-210ENST00000562482 735 ntTSL 218.72■□□□□ 0.596e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.576e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-218ENST00000568288 501 ntTSL 518.31■□□□□ 0.526e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.456e-7■□□□□ 11.3
PHF6Q8IWS0 NFE2L2-210ENST00000462023 521 ntTSL 217.84■□□□□ 0.456e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-209ENST00000562470 433 ntTSL 216.4■□□□□ 0.226e-7■□□□□ 11.3
PHF6Q8IWS0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.97■□□□□ 0.156e-7■□□□□ 11.3
PHF6Q8IWS0 MFGE8-211ENST00000559770 680 ntTSL 215.86■□□□□ 0.136e-7■□□□□ 11.3
PHF6Q8IWS0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.066e-7■□□□□ 11.3
Retrieved 100 of 4,170 protein–RNA pairs in 122.5 ms