RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
PRKCSH-206ENST00000587509 CCDC180Q9P1Z9 1646 aa25.52■■□□□ 1.68
PRKCSH-206ENST00000587509 ABCC9O60706 1549 aa24.95■■□□□ 1.58
PRKCSH-206ENST00000587509 RB1CC1Q8TDY2 1594 aa24.07■■□□□ 1.44
PRKCSH-206ENST00000587509 NACADO15069 1562 aa24■■□□□ 1.43
PRKCSH-206ENST00000587509 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
PRKCSH-206ENST00000587509 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
PRKCSH-206ENST00000587509 ZCCHC6Q5VYS8 1495 aaKnown RBP23.78■■□□□ 1.4
PRKCSH-206ENST00000587509 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
PRKCSH-206ENST00000587509 UNC13AQ9UPW8 1703 aa23.37■■□□□ 1.33
PRKCSH-206ENST00000587509 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRKCSH-206ENST00000587509 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
PRKCSH-206ENST00000587509 BICRAQ9NZM4 1560 aa23.19■■□□□ 1.3
PRKCSH-206ENST00000587509 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
PRKCSH-206ENST00000587509 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
PRKCSH-206ENST00000587509 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
PRKCSH-206ENST00000587509 CC2D2AQ9P2K1 1620 aa22.58■■□□□ 1.21
PRKCSH-206ENST00000587509 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
PRKCSH-206ENST00000587509 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
PRKCSH-206ENST00000587509 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
PRKCSH-206ENST00000587509 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
PRKCSH-206ENST00000587509 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
PRKCSH-206ENST00000587509 ATAD2BQ9ULI0 1458 aa22.07■■□□□ 1.12
PRKCSH-206ENST00000587509 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
PRKCSH-206ENST00000587509 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
PRKCSH-206ENST00000587509 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-206ENST00000587509 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
PRKCSH-206ENST00000587509 WIZO95785 1651 aa21.69■■□□□ 1.06
PRKCSH-206ENST00000587509 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
PRKCSH-206ENST00000587509 ERCC6Q03468 1493 aa21.64■■□□□ 1.05
PRKCSH-206ENST00000587509 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
PRKCSH-206ENST00000587509 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
PRKCSH-206ENST00000587509 NESP48681 1621 aa21.51■■□□□ 1.03
PRKCSH-206ENST00000587509 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
PRKCSH-206ENST00000587509 CUX2O14529 1486 aa21.45■■□□□ 1.02
PRKCSH-206ENST00000587509 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
PRKCSH-206ENST00000587509 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
PRKCSH-206ENST00000587509 THOC2Q8NI27 1593 aaKnown RBP21.29■■□□□ 1
PRKCSH-206ENST00000587509 CFTRP13569 1480 aa21.29■■□□□ 1
PRKCSH-206ENST00000587509 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
PRKCSH-206ENST00000587509 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
PRKCSH-206ENST00000587509 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
PRKCSH-206ENST00000587509 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
PRKCSH-206ENST00000587509 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
PRKCSH-206ENST00000587509 WDR62O43379 1518 aa21.14■□□□□ 0.98
PRKCSH-206ENST00000587509 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
PRKCSH-206ENST00000587509 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
PRKCSH-206ENST00000587509 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
PRKCSH-206ENST00000587509 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
PRKCSH-206ENST00000587509 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
PRKCSH-206ENST00000587509 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
PRKCSH-206ENST00000587509 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
PRKCSH-206ENST00000587509 POLA1P09884 1462 aaPredicted RBP20.66■□□□□ 0.9
PRKCSH-206ENST00000587509 CUX1P39880 1505 aa20.61■□□□□ 0.89
PRKCSH-206ENST00000587509 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-206ENST00000587509 FGD5Q6ZNL6 1462 aa20.6■□□□□ 0.89
PRKCSH-206ENST00000587509 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
PRKCSH-206ENST00000587509 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-206ENST00000587509 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
PRKCSH-206ENST00000587509 SOGA1O94964 1423 aa20.56■□□□□ 0.88
PRKCSH-206ENST00000587509 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
PRKCSH-206ENST00000587509 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
PRKCSH-206ENST00000587509 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
PRKCSH-206ENST00000587509 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
PRKCSH-206ENST00000587509 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.879e-8■■■■■ 30.5
PRKCSH-206ENST00000587509 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
PRKCSH-206ENST00000587509 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
PRKCSH-206ENST00000587509 ABCA10Q8WWZ4 1543 aa20.42■□□□□ 0.86
PRKCSH-206ENST00000587509 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
PRKCSH-206ENST00000587509 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
PRKCSH-206ENST00000587509 MAGI1Q96QZ7 1491 aaPredicted RBP20.38■□□□□ 0.85
PRKCSH-206ENST00000587509 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
PRKCSH-206ENST00000587509 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
PRKCSH-206ENST00000587509 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
PRKCSH-206ENST00000587509 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
PRKCSH-206ENST00000587509 CHD1O14646 1710 aa20.32■□□□□ 0.84
PRKCSH-206ENST00000587509 FBLN2P98095 1184 aa20.29■□□□□ 0.84
PRKCSH-206ENST00000587509 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
PRKCSH-206ENST00000587509 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
PRKCSH-206ENST00000587509 ERICH3Q5RHP9 1530 aa20.2■□□□□ 0.82
PRKCSH-206ENST00000587509 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
PRKCSH-206ENST00000587509 ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
PRKCSH-206ENST00000587509 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
PRKCSH-206ENST00000587509 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
PRKCSH-206ENST00000587509 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
PRKCSH-206ENST00000587509 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
PRKCSH-206ENST00000587509 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
PRKCSH-206ENST00000587509 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
PRKCSH-206ENST00000587509 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
PRKCSH-206ENST00000587509 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
PRKCSH-206ENST00000587509 CUL7Q14999 1698 aa20.03■□□□□ 0.8
PRKCSH-206ENST00000587509 NUP160Q12769 1436 aa20.02■□□□□ 0.79
PRKCSH-206ENST00000587509 CEP170Q5SW79 1584 aa19.97■□□□□ 0.79
PRKCSH-206ENST00000587509 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
PRKCSH-206ENST00000587509 IGF1RP08069 1367 aa19.92■□□□□ 0.78
PRKCSH-206ENST00000587509 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
PRKCSH-206ENST00000587509 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
PRKCSH-206ENST00000587509 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
PRKCSH-206ENST00000587509 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
PRKCSH-206ENST00000587509 KIAA0586Q9BVV6 1533 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms