RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 NISCHQ9Y2I1 1504 aa40.95■■■■■ 4.15
BRD9-201ENST00000466684 ABCC9O60706 1549 aa36.92■■■■□ 3.5
BRD9-201ENST00000466684 CCDC180Q9P1Z9 1646 aa36.84■■■■□ 3.49
BRD9-201ENST00000466684 RB1CC1Q8TDY2 1594 aa35.14■■■■□ 3.22
BRD9-201ENST00000466684 NACADO15069 1562 aa34.86■■■■□ 3.17
BRD9-201ENST00000466684 DNAJC5BQ9UF47 199 aa34.72■■■■□ 3.15
BRD9-201ENST00000466684 DCAF8L2P0C7V8 631 aa34.62■■■■□ 3.13
BRD9-201ENST00000466684 MYO15BQ96JP2 1530 aa34.35■■■■□ 3.09
BRD9-201ENST00000466684 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
BRD9-201ENST00000466684 UNC13AQ9UPW8 1703 aa34.28■■■■□ 3.08
BRD9-201ENST00000466684 BICRAQ9NZM4 1560 aa34.06■■■■□ 3.04
BRD9-201ENST00000466684 ZCCHC6Q5VYS8 1495 aaKnown RBP33.91■■■■□ 3.02
BRD9-201ENST00000466684 DCAF1Q9Y4B6 1507 aa33.85■■■■□ 3.01
BRD9-201ENST00000466684 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
BRD9-201ENST00000466684 SCRIBQ14160 1630 aa33.51■■■□□ 2.95
BRD9-201ENST00000466684 CC2D2AQ9P2K1 1620 aa33.36■■■□□ 2.93
BRD9-201ENST00000466684 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
BRD9-201ENST00000466684 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.91
BRD9-201ENST00000466684 NCAPD3P42695 1498 aa32.17■■■□□ 2.74
BRD9-201ENST00000466684 DNAJC5Q9H3Z4 198 aa32.05■■■□□ 2.72
BRD9-201ENST00000466684 ATAD2BQ9ULI0 1458 aa32.03■■■□□ 2.72
BRD9-201ENST00000466684 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
BRD9-201ENST00000466684 SMARCA4P51532 1647 aa31.97■■■□□ 2.71
BRD9-201ENST00000466684 CUX2O14529 1486 aa31.93■■■□□ 2.7
BRD9-201ENST00000466684 ERCC6Q03468 1493 aa31.93■■■□□ 2.7
BRD9-201ENST00000466684 HMGXB3Q12766 1538 aa31.93■■■□□ 2.7
BRD9-201ENST00000466684 BAZ1AQ9NRL2 1556 aaPredicted RBP31.82■■■□□ 2.68
BRD9-201ENST00000466684 BAZ1BQ9UIG0 1483 aaKnown RBP31.74■■■□□ 2.67
BRD9-201ENST00000466684 PEG3Q9GZU2 1588 aa31.67■■■□□ 2.66
BRD9-201ENST00000466684 NESP48681 1621 aa31.66■■■□□ 2.66
BRD9-201ENST00000466684 MROH2BQ7Z745 1585 aa31.53■■■□□ 2.64
BRD9-201ENST00000466684 LAMC3Q9Y6N6 1575 aa31.49■■■□□ 2.63
BRD9-201ENST00000466684 THOC2Q8NI27 1593 aaKnown RBP31.39■■■□□ 2.62
BRD9-201ENST00000466684 PDS5BQ9NTI5 1447 aa31.32■■■□□ 2.6
BRD9-201ENST00000466684 KIF21AQ7Z4S6 1674 aa31.27■■■□□ 2.6
BRD9-201ENST00000466684 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
BRD9-201ENST00000466684 WIZO95785 1651 aa31.14■■■□□ 2.58
BRD9-201ENST00000466684 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
BRD9-201ENST00000466684 WDR62O43379 1518 aa30.96■■■□□ 2.55
BRD9-201ENST00000466684 CEP164Q9UPV0 1460 aa30.89■■■□□ 2.54
BRD9-201ENST00000466684 RSF1Q96T23 1441 aaPredicted RBP30.83■■■□□ 2.53
BRD9-201ENST00000466684 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
BRD9-201ENST00000466684 CFTRP13569 1480 aa30.8■■■□□ 2.52
BRD9-201ENST00000466684 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
BRD9-201ENST00000466684 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
BRD9-201ENST00000466684 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
BRD9-201ENST00000466684 PRDM2Q13029 1718 aa30.48■■■□□ 2.47
BRD9-201ENST00000466684 OSCARQ8IYS5 282 aa30.45■■■□□ 2.46
BRD9-201ENST00000466684 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
BRD9-201ENST00000466684 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
BRD9-201ENST00000466684 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
BRD9-201ENST00000466684 ABCC8Q09428 1581 aa30.2■■■□□ 2.43
BRD9-201ENST00000466684 ZNF608Q9ULD9 1512 aaPredicted RBP30.2■■■□□ 2.42
BRD9-201ENST00000466684 DNMBPQ6XZF7 1577 aa30.11■■■□□ 2.41
BRD9-201ENST00000466684 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
BRD9-201ENST00000466684 RIMBP3CA6NJZ7 1639 aa30.03■■■□□ 2.4
BRD9-201ENST00000466684 RIMBP3BA6NNM3 1639 aa30.03■■■□□ 2.4
BRD9-201ENST00000466684 RIMBP3Q9UFD9 1639 aa30.03■■■□□ 2.4
BRD9-201ENST00000466684 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
BRD9-201ENST00000466684 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
BRD9-201ENST00000466684 AQRO60306 1485 aaKnown RBP eCLIP29.92■■■□□ 2.384e-8■■■■■ 36
BRD9-201ENST00000466684 POLA1P09884 1462 aaPredicted RBP29.9■■■□□ 2.38
BRD9-201ENST00000466684 CHD1O14646 1710 aa29.84■■■□□ 2.37
BRD9-201ENST00000466684 SOGA1O94964 1423 aa29.78■■■□□ 2.36
BRD9-201ENST00000466684 FBLN2P98095 1184 aa29.78■■■□□ 2.36
BRD9-201ENST00000466684 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
BRD9-201ENST00000466684 CYB5RLQ6IPT4 315 aa29.72■■■□□ 2.35
BRD9-201ENST00000466684 TDRD9Q8NDG6 1382 aaKnown RBP29.71■■■□□ 2.35
BRD9-201ENST00000466684 WDR97A6NE52 1622 aa29.7■■■□□ 2.35
BRD9-201ENST00000466684 FGD5Q6ZNL6 1462 aa29.69■■■□□ 2.34
BRD9-201ENST00000466684 CUX1P39880 1505 aa29.63■■■□□ 2.33
BRD9-201ENST00000466684 SNAPC4Q5SXM2 1469 aa29.62■■■□□ 2.33
BRD9-201ENST00000466684 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
BRD9-201ENST00000466684 MAGI1Q96QZ7 1491 aaPredicted RBP29.57■■■□□ 2.32
BRD9-201ENST00000466684 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
BRD9-201ENST00000466684 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
BRD9-201ENST00000466684 SYNJ1O43426 1573 aa29.51■■■□□ 2.31
BRD9-201ENST00000466684 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
BRD9-201ENST00000466684 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
BRD9-201ENST00000466684 TRHP20396 242 aaPredicted RBP29.45■■■□□ 2.31
BRD9-201ENST00000466684 GAPVD1Q14C86 1478 aa29.41■■■□□ 2.3
BRD9-201ENST00000466684 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
BRD9-201ENST00000466684 ABCA10Q8WWZ4 1543 aa29.36■■■□□ 2.29
BRD9-201ENST00000466684 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
BRD9-201ENST00000466684 ABCA5Q8WWZ7 1642 aa29.32■■■□□ 2.28
BRD9-201ENST00000466684 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.277e-9■■□□□ 11.4
BRD9-201ENST00000466684 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
BRD9-201ENST00000466684 TOP2BQ02880 1626 aa29.15■■■□□ 2.26
BRD9-201ENST00000466684 BIVM-ERCC5R4GMW8 1640 aa29.15■■■□□ 2.26
BRD9-201ENST00000466684 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
BRD9-201ENST00000466684 NUP160Q12769 1436 aa29.06■■■□□ 2.24
BRD9-201ENST00000466684 FHAD1B1AJZ9 1412 aa29.04■■■□□ 2.24
BRD9-201ENST00000466684 CEP170Q5SW79 1584 aa29.04■■■□□ 2.24
BRD9-201ENST00000466684 ERICH3Q5RHP9 1530 aa29■■■□□ 2.23
BRD9-201ENST00000466684 ERCC6L2Q5T890 1561 aa28.99■■■□□ 2.23
BRD9-201ENST00000466684 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
BRD9-201ENST00000466684 PRG4Q92954 1404 aaPredicted RBP28.8■■■□□ 2.2
BRD9-201ENST00000466684 JPH4Q96JJ6 628 aa28.77■■■□□ 2.2
BRD9-201ENST00000466684 AEBP2Q6ZN18 517 aaPredicted RBP28.72■■■□□ 2.19
BRD9-201ENST00000466684 RUSC2Q8N2Y8 1516 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms