RNA–Protein interactions for RNA: ENST00000483173.5

BRD9-204, Transcript of bromodomain containing 9, humanhuman

TSL 2 BASIC

Gene BRD9, Length 2,120 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-204ENST00000483173 NISCHQ9Y2I1 1504 aa28.91■■■□□ 2.22
BRD9-204ENST00000483173 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
BRD9-204ENST00000483173 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
BRD9-204ENST00000483173 ABCC9O60706 1549 aa23.99■■□□□ 1.43
BRD9-204ENST00000483173 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
BRD9-204ENST00000483173 DCAF1Q9Y4B6 1507 aa23.9■■□□□ 1.42
BRD9-204ENST00000483173 MYO15BQ96JP2 1530 aa23.66■■□□□ 1.38
BRD9-204ENST00000483173 NACADO15069 1562 aa23.55■■□□□ 1.36
BRD9-204ENST00000483173 SHROOM4Q9ULL8 1493 aa23.5■■□□□ 1.35
BRD9-204ENST00000483173 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
BRD9-204ENST00000483173 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
BRD9-204ENST00000483173 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
BRD9-204ENST00000483173 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
BRD9-204ENST00000483173 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
BRD9-204ENST00000483173 SUPT5HO00267 1087 aaKnown RBP22.56■■□□□ 1.2
BRD9-204ENST00000483173 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
BRD9-204ENST00000483173 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
BRD9-204ENST00000483173 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
BRD9-204ENST00000483173 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
BRD9-204ENST00000483173 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
BRD9-204ENST00000483173 WIZO95785 1651 aa22.13■■□□□ 1.13
BRD9-204ENST00000483173 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
BRD9-204ENST00000483173 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
BRD9-204ENST00000483173 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
BRD9-204ENST00000483173 TOP2AP11388 1531 aaKnown RBP21.91■■□□□ 1.1
BRD9-204ENST00000483173 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
BRD9-204ENST00000483173 BAZ1BQ9UIG0 1483 aaKnown RBP21.78■■□□□ 1.08
BRD9-204ENST00000483173 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
BRD9-204ENST00000483173 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
BRD9-204ENST00000483173 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
BRD9-204ENST00000483173 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
BRD9-204ENST00000483173 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
BRD9-204ENST00000483173 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
BRD9-204ENST00000483173 CFTRP13569 1480 aa21.23■□□□□ 0.99
BRD9-204ENST00000483173 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
BRD9-204ENST00000483173 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
BRD9-204ENST00000483173 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
BRD9-204ENST00000483173 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
BRD9-204ENST00000483173 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.967e-9■■□□□ 11.4
BRD9-204ENST00000483173 NESP48681 1621 aa21.03■□□□□ 0.96
BRD9-204ENST00000483173 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
BRD9-204ENST00000483173 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
BRD9-204ENST00000483173 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
BRD9-204ENST00000483173 TOP2BQ02880 1626 aa20.91■□□□□ 0.94
BRD9-204ENST00000483173 CUX1P39880 1505 aa20.89■□□□□ 0.93
BRD9-204ENST00000483173 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
BRD9-204ENST00000483173 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
BRD9-204ENST00000483173 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.92
BRD9-204ENST00000483173 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
BRD9-204ENST00000483173 SOGA1O94964 1423 aa20.78■□□□□ 0.92
BRD9-204ENST00000483173 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
BRD9-204ENST00000483173 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
BRD9-204ENST00000483173 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
BRD9-204ENST00000483173 EEA1Q15075 1411 aa20.71■□□□□ 0.91
BRD9-204ENST00000483173 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
BRD9-204ENST00000483173 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
BRD9-204ENST00000483173 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
BRD9-204ENST00000483173 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
BRD9-204ENST00000483173 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
BRD9-204ENST00000483173 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
BRD9-204ENST00000483173 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
BRD9-204ENST00000483173 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
BRD9-204ENST00000483173 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
BRD9-204ENST00000483173 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
BRD9-204ENST00000483173 RAD54L2Q9Y4B4 1467 aa20.53■□□□□ 0.88
BRD9-204ENST00000483173 CUX2O14529 1486 aa20.52■□□□□ 0.88
BRD9-204ENST00000483173 WDR62O43379 1518 aa20.5■□□□□ 0.87
BRD9-204ENST00000483173 ABCA10Q8WWZ4 1543 aa20.5■□□□□ 0.87
BRD9-204ENST00000483173 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
BRD9-204ENST00000483173 KIF21BO75037 1637 aa20.44■□□□□ 0.86
BRD9-204ENST00000483173 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
BRD9-204ENST00000483173 GOLGA3Q08378 1498 aa20.42■□□□□ 0.86
BRD9-204ENST00000483173 TARBP1Q13395 1621 aaKnown RBP20.4■□□□□ 0.86
BRD9-204ENST00000483173 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
BRD9-204ENST00000483173 IGF1RP08069 1367 aa20.39■□□□□ 0.85
BRD9-204ENST00000483173 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
BRD9-204ENST00000483173 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
BRD9-204ENST00000483173 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
BRD9-204ENST00000483173 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
BRD9-204ENST00000483173 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.85
BRD9-204ENST00000483173 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.85
BRD9-204ENST00000483173 IFT140Q96RY7 1462 aa20.33■□□□□ 0.85
BRD9-204ENST00000483173 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
BRD9-204ENST00000483173 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
BRD9-204ENST00000483173 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.834e-7■■■■■ 37.4
BRD9-204ENST00000483173 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
BRD9-204ENST00000483173 CUL7Q14999 1698 aa20.22■□□□□ 0.83
BRD9-204ENST00000483173 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
BRD9-204ENST00000483173 PBRM1Q86U86 1689 aa20.17■□□□□ 0.82
BRD9-204ENST00000483173 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
BRD9-204ENST00000483173 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
BRD9-204ENST00000483173 CLIP1P30622 1438 aa20.09■□□□□ 0.81
BRD9-204ENST00000483173 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
BRD9-204ENST00000483173 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
BRD9-204ENST00000483173 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
BRD9-204ENST00000483173 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
BRD9-204ENST00000483173 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
BRD9-204ENST00000483173 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
BRD9-204ENST00000483173 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
BRD9-204ENST00000483173 SYNJ2O15056 1496 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms