RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
BRD9-203ENST00000475706 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
BRD9-203ENST00000475706 ABCC9O60706 1549 aa24.67■■□□□ 1.54
BRD9-203ENST00000475706 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
BRD9-203ENST00000475706 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
BRD9-203ENST00000475706 NACADO15069 1562 aa23.59■■□□□ 1.37
BRD9-203ENST00000475706 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
BRD9-203ENST00000475706 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
BRD9-203ENST00000475706 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
BRD9-203ENST00000475706 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
BRD9-203ENST00000475706 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
BRD9-203ENST00000475706 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
BRD9-203ENST00000475706 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
BRD9-203ENST00000475706 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
BRD9-203ENST00000475706 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
BRD9-203ENST00000475706 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
BRD9-203ENST00000475706 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
BRD9-203ENST00000475706 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
BRD9-203ENST00000475706 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
BRD9-203ENST00000475706 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
BRD9-203ENST00000475706 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.07
BRD9-203ENST00000475706 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
BRD9-203ENST00000475706 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
BRD9-203ENST00000475706 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
BRD9-203ENST00000475706 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
BRD9-203ENST00000475706 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
BRD9-203ENST00000475706 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
BRD9-203ENST00000475706 WIZO95785 1651 aa21.53■■□□□ 1.04
BRD9-203ENST00000475706 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
BRD9-203ENST00000475706 NESP48681 1621 aa21.32■■□□□ 1
BRD9-203ENST00000475706 ERCC6Q03468 1493 aa21.27■■□□□ 1
BRD9-203ENST00000475706 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
BRD9-203ENST00000475706 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
BRD9-203ENST00000475706 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
BRD9-203ENST00000475706 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
BRD9-203ENST00000475706 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
BRD9-203ENST00000475706 CUX2O14529 1486 aa21.01■□□□□ 0.95
BRD9-203ENST00000475706 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
BRD9-203ENST00000475706 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
BRD9-203ENST00000475706 CFTRP13569 1480 aa20.97■□□□□ 0.95
BRD9-203ENST00000475706 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
BRD9-203ENST00000475706 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
BRD9-203ENST00000475706 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
BRD9-203ENST00000475706 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.94
BRD9-203ENST00000475706 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
BRD9-203ENST00000475706 WDR62O43379 1518 aa20.78■□□□□ 0.92
BRD9-203ENST00000475706 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
BRD9-203ENST00000475706 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
BRD9-203ENST00000475706 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
BRD9-203ENST00000475706 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
BRD9-203ENST00000475706 DNAJC5Q9H3Z4 198 aa20.49■□□□□ 0.87
BRD9-203ENST00000475706 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
BRD9-203ENST00000475706 CUX1P39880 1505 aa20.37■□□□□ 0.85
BRD9-203ENST00000475706 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
BRD9-203ENST00000475706 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
BRD9-203ENST00000475706 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
BRD9-203ENST00000475706 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
BRD9-203ENST00000475706 RAD54L2Q9Y4B4 1467 aa20.33■□□□□ 0.85
BRD9-203ENST00000475706 SOGA1O94964 1423 aa20.32■□□□□ 0.84
BRD9-203ENST00000475706 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
BRD9-203ENST00000475706 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.847e-7■■■■■ 39
BRD9-203ENST00000475706 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
BRD9-203ENST00000475706 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.837e-9■■□□□ 11.4
BRD9-203ENST00000475706 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
BRD9-203ENST00000475706 SYNJ1O43426 1573 aa20.19■□□□□ 0.82
BRD9-203ENST00000475706 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
BRD9-203ENST00000475706 TOP2BQ02880 1626 aa20.18■□□□□ 0.82
BRD9-203ENST00000475706 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
BRD9-203ENST00000475706 CHD1O14646 1710 aa20.13■□□□□ 0.81
BRD9-203ENST00000475706 FBLN2P98095 1184 aa20.12■□□□□ 0.81
BRD9-203ENST00000475706 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
BRD9-203ENST00000475706 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
BRD9-203ENST00000475706 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
BRD9-203ENST00000475706 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
BRD9-203ENST00000475706 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
BRD9-203ENST00000475706 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
BRD9-203ENST00000475706 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
BRD9-203ENST00000475706 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
BRD9-203ENST00000475706 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
BRD9-203ENST00000475706 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
BRD9-203ENST00000475706 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
BRD9-203ENST00000475706 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
BRD9-203ENST00000475706 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
BRD9-203ENST00000475706 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
BRD9-203ENST00000475706 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
BRD9-203ENST00000475706 ARHGEF11O15085 1522 aa19.83■□□□□ 0.77
BRD9-203ENST00000475706 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
BRD9-203ENST00000475706 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
BRD9-203ENST00000475706 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
BRD9-203ENST00000475706 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
BRD9-203ENST00000475706 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
BRD9-203ENST00000475706 IGF1RP08069 1367 aa19.71■□□□□ 0.75
BRD9-203ENST00000475706 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
BRD9-203ENST00000475706 CUL7Q14999 1698 aa19.71■□□□□ 0.75
BRD9-203ENST00000475706 NUP160Q12769 1436 aa19.69■□□□□ 0.74
BRD9-203ENST00000475706 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
BRD9-203ENST00000475706 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
BRD9-203ENST00000475706 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
BRD9-203ENST00000475706 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
BRD9-203ENST00000475706 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms