Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.5■■■□□ 2.15
COL15A1P39059 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL15A1P39059 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.5■■■□□ 2.15
COL15A1P39059 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
COL15A1P39059 NTF6G-201ENST00000591094 616 ntBASIC28.5■■■□□ 2.15
COL15A1P39059 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
COL15A1P39059 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
COL15A1P39059 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.49■■■□□ 2.15
COL15A1P39059 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL15A1P39059 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC28.49■■■□□ 2.15
COL15A1P39059 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL15A1P39059 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL15A1P39059 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL15A1P39059 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.49■■■□□ 2.15
COL15A1P39059 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL15A1P39059 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.48■■■□□ 2.15
COL15A1P39059 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL15A1P39059 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL15A1P39059 LINC02228-203ENST00000641970 1355 ntBASIC28.48■■■□□ 2.15
COL15A1P39059 AC135731.1-201ENST00000569415 2548 ntBASIC28.48■■■□□ 2.15
COL15A1P39059 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.48■■■□□ 2.15
COL15A1P39059 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
COL15A1P39059 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL15A1P39059 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL15A1P39059 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL15A1P39059 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
COL15A1P39059 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.47■■■□□ 2.15
COL15A1P39059 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.47■■■□□ 2.15
COL15A1P39059 LHPP-203ENST00000392757 840 ntTSL 3 BASIC28.47■■■□□ 2.15
COL15A1P39059 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
COL15A1P39059 DUX4L4-201ENST00000566884 1269 ntBASIC28.47■■■□□ 2.15
COL15A1P39059 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.47■■■□□ 2.15
COL15A1P39059 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.47■■■□□ 2.15
COL15A1P39059 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
COL15A1P39059 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL15A1P39059 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
COL15A1P39059 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
COL15A1P39059 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
COL15A1P39059 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
COL15A1P39059 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC28.45■■■□□ 2.14
COL15A1P39059 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC28.45■■■□□ 2.14
COL15A1P39059 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
COL15A1P39059 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL15A1P39059 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
COL15A1P39059 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.44■■■□□ 2.14
COL15A1P39059 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.44■■■□□ 2.14
COL15A1P39059 ID1-201ENST00000376105 1233 ntBASIC28.44■■■□□ 2.14
COL15A1P39059 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.44■■■□□ 2.14
COL15A1P39059 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.44■■■□□ 2.14
COL15A1P39059 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.44■■■□□ 2.14
COL15A1P39059 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL15A1P39059 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL15A1P39059 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.43■■■□□ 2.14
COL15A1P39059 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC28.43■■■□□ 2.14
COL15A1P39059 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.43■■■□□ 2.14
COL15A1P39059 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL15A1P39059 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
COL15A1P39059 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
COL15A1P39059 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL15A1P39059 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.43■■■□□ 2.14
COL15A1P39059 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.43■■■□□ 2.14
COL15A1P39059 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL15A1P39059 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL15A1P39059 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL15A1P39059 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL15A1P39059 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
COL15A1P39059 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL15A1P39059 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.42■■■□□ 2.14
COL15A1P39059 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL15A1P39059 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL15A1P39059 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL15A1P39059 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
COL15A1P39059 FP325331.1-202ENST00000623531 1380 ntBASIC28.42■■■□□ 2.14
COL15A1P39059 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.42■■■□□ 2.14
COL15A1P39059 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL15A1P39059 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC28.41■■■□□ 2.14
COL15A1P39059 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL15A1P39059 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
COL15A1P39059 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.41■■■□□ 2.14
COL15A1P39059 AP005435.1-201ENST00000529293 1178 ntBASIC28.41■■■□□ 2.14
COL15A1P39059 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
COL15A1P39059 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
COL15A1P39059 MPST-204ENST00000404393 1329 ntTSL 5 BASIC28.41■■■□□ 2.14
COL15A1P39059 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL15A1P39059 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
COL15A1P39059 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC28.41■■■□□ 2.14
COL15A1P39059 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
COL15A1P39059 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL15A1P39059 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL15A1P39059 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL15A1P39059 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC28.4■■■□□ 2.14
COL15A1P39059 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.4■■■□□ 2.14
COL15A1P39059 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC28.4■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms