Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 AL592295.1-201ENST00000400984 884 ntBASIC21.39■■□□□ 1.01
LINGO3P0C6S8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LINGO3P0C6S8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINGO3P0C6S8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 AC007952.6-201ENST00000573168 2673 ntBASIC21.37■■□□□ 1.01
LINGO3P0C6S8 AC003957.1-201ENST00000625108 2673 ntBASIC21.37■■□□□ 1.01
LINGO3P0C6S8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LINGO3P0C6S8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LINGO3P0C6S8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 AC022616.5-201ENST00000518796 181 ntBASIC21.35■■□□□ 1.01
LINGO3P0C6S8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.35■■□□□ 1.01
LINGO3P0C6S8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LINGO3P0C6S8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LINGO3P0C6S8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LINGO3P0C6S8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LINGO3P0C6S8 AC103834.1-201ENST00000520383 144 ntBASIC21.33■■□□□ 1.01
LINGO3P0C6S8 MIR4508-201ENST00000584178 70 ntBASIC21.33■■□□□ 1.01
LINGO3P0C6S8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.33■■□□□ 1
LINGO3P0C6S8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.33■■□□□ 1
LINGO3P0C6S8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LINGO3P0C6S8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LINGO3P0C6S8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LINGO3P0C6S8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LINGO3P0C6S8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.32■■□□□ 1
LINGO3P0C6S8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LINGO3P0C6S8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LINGO3P0C6S8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.32■■□□□ 1
LINGO3P0C6S8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LINGO3P0C6S8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LINGO3P0C6S8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
LINGO3P0C6S8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.31■■□□□ 1
LINGO3P0C6S8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.31■■□□□ 1
LINGO3P0C6S8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LINGO3P0C6S8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms