Protein–RNA interactions for Protein: P04183

TK1, Thymidine kinase, cytosolic, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TK1P04183 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TK1P04183 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.87■□□□□ 0.61
TK1P04183 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.87■□□□□ 0.61
TK1P04183 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.87■□□□□ 0.61
TK1P04183 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TK1P04183 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.86■□□□□ 0.61
TK1P04183 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.86■□□□□ 0.61
TK1P04183 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.86■□□□□ 0.61
TK1P04183 UNC93B8-201ENST00000511903 705 ntBASIC18.86■□□□□ 0.61
TK1P04183 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TK1P04183 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TK1P04183 C1orf229-201ENST00000623686 2258 ntBASIC18.86■□□□□ 0.61
TK1P04183 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TK1P04183 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TK1P04183 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TK1P04183 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.85■□□□□ 0.61
TK1P04183 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TK1P04183 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 GUSBP5-201ENST00000418136 578 ntBASIC18.85■□□□□ 0.61
TK1P04183 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TK1P04183 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TK1P04183 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TK1P04183 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TK1P04183 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TK1P04183 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.84■□□□□ 0.61
TK1P04183 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TK1P04183 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.84■□□□□ 0.61
TK1P04183 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.84■□□□□ 0.61
TK1P04183 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
TK1P04183 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TK1P04183 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TK1P04183 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TK1P04183 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.84■□□□□ 0.61
TK1P04183 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TK1P04183 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TK1P04183 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TK1P04183 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TK1P04183 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TK1P04183 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TK1P04183 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TK1P04183 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.83■□□□□ 0.6
TK1P04183 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TK1P04183 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.83■□□□□ 0.6
TK1P04183 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TK1P04183 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TK1P04183 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.83■□□□□ 0.6
TK1P04183 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.82■□□□□ 0.6
TK1P04183 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.82■□□□□ 0.6
TK1P04183 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TK1P04183 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.82■□□□□ 0.6
TK1P04183 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.82■□□□□ 0.6
TK1P04183 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TK1P04183 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.82■□□□□ 0.6
TK1P04183 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TK1P04183 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TK1P04183 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.81■□□□□ 0.6
TK1P04183 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TK1P04183 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.81■□□□□ 0.6
TK1P04183 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TK1P04183 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TK1P04183 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TK1P04183 KRT16P3-201ENST00000439127 1283 ntBASIC18.81■□□□□ 0.6
TK1P04183 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TK1P04183 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TK1P04183 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TK1P04183 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TK1P04183 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TK1P04183 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TK1P04183 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TK1P04183 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms