Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.64■□□□□ 0.89
SOX30O94993 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SOX30O94993 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.64■□□□□ 0.89
SOX30O94993 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX30O94993 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX30O94993 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.63■□□□□ 0.89
SOX30O94993 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SOX30O94993 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.63■□□□□ 0.89
SOX30O94993 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX30O94993 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
SOX30O94993 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX30O94993 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX30O94993 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOX30O94993 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.62■□□□□ 0.89
SOX30O94993 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.62■□□□□ 0.89
SOX30O94993 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX30O94993 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX30O94993 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX30O94993 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.62■□□□□ 0.89
SOX30O94993 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX30O94993 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.62■□□□□ 0.89
SOX30O94993 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX30O94993 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX30O94993 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.62■□□□□ 0.89
SOX30O94993 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX30O94993 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX30O94993 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX30O94993 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX30O94993 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.61■□□□□ 0.89
SOX30O94993 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.61■□□□□ 0.89
SOX30O94993 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX30O94993 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.61■□□□□ 0.89
SOX30O94993 MIR3621-201ENST00000580529 85 ntBASIC20.61■□□□□ 0.89
SOX30O94993 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.61■□□□□ 0.89
SOX30O94993 CLDN5-201ENST00000403084 2357 ntBASIC20.61■□□□□ 0.89
SOX30O94993 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX30O94993 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX30O94993 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX30O94993 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.61■□□□□ 0.89
SOX30O94993 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SOX30O94993 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX30O94993 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOX30O94993 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SOX30O94993 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SOX30O94993 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.6■□□□□ 0.89
SOX30O94993 AC092171.4-201ENST00000609130 632 ntBASIC20.6■□□□□ 0.89
SOX30O94993 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX30O94993 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX30O94993 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX30O94993 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOX30O94993 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SOX30O94993 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.59■□□□□ 0.89
SOX30O94993 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX30O94993 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX30O94993 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.59■□□□□ 0.89
SOX30O94993 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX30O94993 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SOX30O94993 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.58■□□□□ 0.89
SOX30O94993 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX30O94993 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX30O94993 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SOX30O94993 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SOX30O94993 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.58■□□□□ 0.88
SOX30O94993 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SOX30O94993 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SOX30O94993 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SOX30O94993 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.57■□□□□ 0.88
SOX30O94993 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.57■□□□□ 0.88
SOX30O94993 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX30O94993 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SOX30O94993 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX30O94993 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SOX30O94993 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.57■□□□□ 0.88
SOX30O94993 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX30O94993 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.56■□□□□ 0.88
SOX30O94993 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SOX30O94993 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SOX30O94993 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SOX30O94993 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX30O94993 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.56■□□□□ 0.88
SOX30O94993 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 AL499627.2-201ENST00000606283 725 ntBASIC20.56■□□□□ 0.88
SOX30O94993 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.56■□□□□ 0.88
SOX30O94993 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SOX30O94993 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SOX30O94993 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX30O94993 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX30O94993 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms