Protein–RNA interactions for Protein: O75865

TRAPPC6A, Trafficking protein particle complex subunit 6A, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6AO75865 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRAPPC6AO75865 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 AC091305.1-201ENST00000479476 895 ntBASIC20.2■□□□□ 0.82
TRAPPC6AO75865 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 AC027682.1-201ENST00000562846 899 ntBASIC20.2■□□□□ 0.82
TRAPPC6AO75865 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAPPC6AO75865 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 AC099791.1-201ENST00000416440 715 ntBASIC20.19■□□□□ 0.82
TRAPPC6AO75865 AC233992.3-201ENST00000607491 485 ntBASIC20.19■□□□□ 0.82
TRAPPC6AO75865 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 RASA4CP-201ENST00000424092 1398 ntBASIC20.19■□□□□ 0.82
TRAPPC6AO75865 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAPPC6AO75865 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 AL499627.2-201ENST00000606283 725 ntBASIC20.18■□□□□ 0.82
TRAPPC6AO75865 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAPPC6AO75865 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 ZNRF2P3-201ENST00000424200 374 ntBASIC20.17■□□□□ 0.82
TRAPPC6AO75865 AC105265.2-201ENST00000467189 838 ntBASIC20.17■□□□□ 0.82
TRAPPC6AO75865 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 CA15P2-201ENST00000611168 834 ntBASIC20.17■□□□□ 0.82
TRAPPC6AO75865 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAPPC6AO75865 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 AL353803.4-201ENST00000565882 1934 ntBASIC20.16■□□□□ 0.82
TRAPPC6AO75865 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 BX842568.3-201ENST00000418104 571 ntBASIC20.16■□□□□ 0.82
TRAPPC6AO75865 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 AC126544.1-201ENST00000580842 1059 ntBASIC20.16■□□□□ 0.82
TRAPPC6AO75865 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAPPC6AO75865 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.15■□□□□ 0.82
TRAPPC6AO75865 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAPPC6AO75865 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAPPC6AO75865 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms