Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BLOC1S4Q9NUP1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.94■■□□□ 1.58
BLOC1S4Q9NUP1 DUX4L4-201ENST00000566884 1269 ntBASIC24.94■■□□□ 1.58
BLOC1S4Q9NUP1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
BLOC1S4Q9NUP1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
BLOC1S4Q9NUP1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.92■■□□□ 1.58
BLOC1S4Q9NUP1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
BLOC1S4Q9NUP1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 MIR4466-201ENST00000606121 54 ntBASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
BLOC1S4Q9NUP1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
BLOC1S4Q9NUP1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
BLOC1S4Q9NUP1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.89■■□□□ 1.58
BLOC1S4Q9NUP1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.58
BLOC1S4Q9NUP1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.89■■□□□ 1.58
BLOC1S4Q9NUP1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
BLOC1S4Q9NUP1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.89■■□□□ 1.57
BLOC1S4Q9NUP1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
BLOC1S4Q9NUP1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.89■■□□□ 1.57
BLOC1S4Q9NUP1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
BLOC1S4Q9NUP1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.57
BLOC1S4Q9NUP1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
BLOC1S4Q9NUP1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.87■■□□□ 1.57
BLOC1S4Q9NUP1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.87■■□□□ 1.57
BLOC1S4Q9NUP1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
BLOC1S4Q9NUP1 C1orf229-201ENST00000623686 2258 ntBASIC24.87■■□□□ 1.57
BLOC1S4Q9NUP1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
BLOC1S4Q9NUP1 AC131281.2-201ENST00000520478 145 ntBASIC24.87■■□□□ 1.57
BLOC1S4Q9NUP1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
BLOC1S4Q9NUP1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 AC012676.1-201ENST00000574705 1949 ntBASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.86■■□□□ 1.57
BLOC1S4Q9NUP1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.85■■□□□ 1.57
BLOC1S4Q9NUP1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BLOC1S4Q9NUP1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms