Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRTFDC1Q9NRG1 AL353803.4-201ENST00000565882 1934 ntBASIC20.98■□□□□ 0.95
PRTFDC1Q9NRG1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 UNC93B3-201ENST00000308076 687 ntBASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 pRNA.6-201ENST00000610482 90 ntBASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 pRNA.5-201ENST00000612139 90 ntBASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 pRNA.11-201ENST00000618423 90 ntBASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 pRNA.13-201ENST00000619112 90 ntBASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRTFDC1Q9NRG1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.96■□□□□ 0.95
PRTFDC1Q9NRG1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 SERBP1P1-201ENST00000396021 1160 ntBASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.95■□□□□ 0.94
PRTFDC1Q9NRG1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 MIR3181-201ENST00000578512 73 ntBASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.94■□□□□ 0.94
PRTFDC1Q9NRG1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 AL138724.1-201ENST00000606771 1088 ntBASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 AL136162.1-201ENST00000607711 1078 ntBASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRTFDC1Q9NRG1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 AC110285.6-201ENST00000617652 491 ntBASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRTFDC1Q9NRG1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 AL499627.2-201ENST00000606283 725 ntBASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 AL139246.5-201ENST00000606645 996 ntBASIC20.91■□□□□ 0.94
PRTFDC1Q9NRG1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms