Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VCX3BQ9H321 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VCX3BQ9H321 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
VCX3BQ9H321 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCX3BQ9H321 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.22■□□□□ 0.99
VCX3BQ9H321 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
VCX3BQ9H321 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCX3BQ9H321 MIR3665-201ENST00000578708 105 ntBASIC21.22■□□□□ 0.99
VCX3BQ9H321 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCX3BQ9H321 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCX3BQ9H321 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.22■□□□□ 0.99
VCX3BQ9H321 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
VCX3BQ9H321 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.22■□□□□ 0.99
VCX3BQ9H321 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.22■□□□□ 0.99
VCX3BQ9H321 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VCX3BQ9H321 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCX3BQ9H321 AC026310.3-201ENST00000625186 2373 ntBASIC21.21■□□□□ 0.99
VCX3BQ9H321 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.21■□□□□ 0.99
VCX3BQ9H321 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
VCX3BQ9H321 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCX3BQ9H321 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VCX3BQ9H321 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.2■□□□□ 0.98
VCX3BQ9H321 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VCX3BQ9H321 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VCX3BQ9H321 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VCX3BQ9H321 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VCX3BQ9H321 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.19■□□□□ 0.98
VCX3BQ9H321 AC126177.7-201ENST00000547904 679 ntBASIC21.19■□□□□ 0.98
VCX3BQ9H321 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.19■□□□□ 0.98
VCX3BQ9H321 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VCX3BQ9H321 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
VCX3BQ9H321 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
VCX3BQ9H321 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VCX3BQ9H321 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VCX3BQ9H321 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.18■□□□□ 0.98
VCX3BQ9H321 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VCX3BQ9H321 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VCX3BQ9H321 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.18■□□□□ 0.98
VCX3BQ9H321 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VCX3BQ9H321 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
VCX3BQ9H321 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VCX3BQ9H321 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VCX3BQ9H321 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VCX3BQ9H321 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VCX3BQ9H321 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VCX3BQ9H321 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VCX3BQ9H321 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.17■□□□□ 0.98
VCX3BQ9H321 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
VCX3BQ9H321 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VCX3BQ9H321 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VCX3BQ9H321 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VCX3BQ9H321 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VCX3BQ9H321 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.17■□□□□ 0.98
VCX3BQ9H321 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VCX3BQ9H321 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.17■□□□□ 0.98
VCX3BQ9H321 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
VCX3BQ9H321 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VCX3BQ9H321 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VCX3BQ9H321 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VCX3BQ9H321 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VCX3BQ9H321 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.16■□□□□ 0.98
VCX3BQ9H321 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VCX3BQ9H321 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
VCX3BQ9H321 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VCX3BQ9H321 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCX3BQ9H321 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VCX3BQ9H321 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.15■□□□□ 0.98
VCX3BQ9H321 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.15■□□□□ 0.98
VCX3BQ9H321 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCX3BQ9H321 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
VCX3BQ9H321 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCX3BQ9H321 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VCX3BQ9H321 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VCX3BQ9H321 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VCX3BQ9H321 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VCX3BQ9H321 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VCX3BQ9H321 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
VCX3BQ9H321 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VCX3BQ9H321 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VCX3BQ9H321 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VCX3BQ9H321 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
VCX3BQ9H321 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
VCX3BQ9H321 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VCX3BQ9H321 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms