Protein–RNA interactions for Protein: Q8TCQ1

MARCH1, E3 ubiquitin-protein ligase MARCH1, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH1Q8TCQ1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MARCH1Q8TCQ1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.71■□□□□ 0.59
MARCH1Q8TCQ1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.71■□□□□ 0.59
MARCH1Q8TCQ1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MARCH1Q8TCQ1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 FBXW4P1-201ENST00000426721 2239 ntBASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 AC131274.2-201ENST00000580697 1507 ntBASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MARCH1Q8TCQ1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 AC009831.1-201ENST00000580420 1582 ntBASIC18.68■□□□□ 0.58
MARCH1Q8TCQ1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MARCH1Q8TCQ1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 AC133552.2-201ENST00000619106 1032 ntBASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.66■□□□□ 0.58
MARCH1Q8TCQ1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 AC080038.3-201ENST00000623346 1952 ntBASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MARCH1Q8TCQ1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.64■□□□□ 0.58
MARCH1Q8TCQ1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MARCH1Q8TCQ1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.64■□□□□ 0.58
MARCH1Q8TCQ1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MARCH1Q8TCQ1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.64■□□□□ 0.57
MARCH1Q8TCQ1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.64■□□□□ 0.57
MARCH1Q8TCQ1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MARCH1Q8TCQ1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MARCH1Q8TCQ1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MARCH1Q8TCQ1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms