Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
LTBP4Q8N2S1 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.8■■■□□ 2.68
LTBP4Q8N2S1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.8■■■□□ 2.68
LTBP4Q8N2S1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.8■■■□□ 2.68
LTBP4Q8N2S1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
LTBP4Q8N2S1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC31.79■■■□□ 2.68
LTBP4Q8N2S1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
LTBP4Q8N2S1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.79■■■□□ 2.68
LTBP4Q8N2S1 RNA5SP413-201ENST00000516373 109 ntBASIC31.79■■■□□ 2.68
LTBP4Q8N2S1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
LTBP4Q8N2S1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LTBP4Q8N2S1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LTBP4Q8N2S1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
LTBP4Q8N2S1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
LTBP4Q8N2S1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.77■■■□□ 2.68
LTBP4Q8N2S1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC31.77■■■□□ 2.68
LTBP4Q8N2S1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
LTBP4Q8N2S1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC31.76■■■□□ 2.67
LTBP4Q8N2S1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.76■■■□□ 2.67
LTBP4Q8N2S1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
LTBP4Q8N2S1 AC097639.1-201ENST00000565519 1891 ntBASIC31.76■■■□□ 2.67
LTBP4Q8N2S1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 AC010331.1-201ENST00000611423 582 ntBASIC31.75■■■□□ 2.67
LTBP4Q8N2S1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
LTBP4Q8N2S1 AC007322.1-201ENST00000426983 750 ntBASIC31.74■■■□□ 2.67
LTBP4Q8N2S1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
LTBP4Q8N2S1 RPS2P4-201ENST00000476944 856 ntBASIC31.74■■■□□ 2.67
LTBP4Q8N2S1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
LTBP4Q8N2S1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.73■■■□□ 2.67
LTBP4Q8N2S1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
LTBP4Q8N2S1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
LTBP4Q8N2S1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LTBP4Q8N2S1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
LTBP4Q8N2S1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
LTBP4Q8N2S1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
LTBP4Q8N2S1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.72■■■□□ 2.67
LTBP4Q8N2S1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
LTBP4Q8N2S1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
LTBP4Q8N2S1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.72■■■□□ 2.67
LTBP4Q8N2S1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
LTBP4Q8N2S1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
LTBP4Q8N2S1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
LTBP4Q8N2S1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.7■■■□□ 2.66
LTBP4Q8N2S1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.66
LTBP4Q8N2S1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 AC096887.2-201ENST00000623443 1957 ntBASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 RARRES2P4-201ENST00000514074 484 ntBASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 AL022069.1-201ENST00000568025 1636 ntBASIC31.69■■■□□ 2.66
LTBP4Q8N2S1 FAM210CP-201ENST00000445714 574 ntBASIC31.68■■■□□ 2.66
LTBP4Q8N2S1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
LTBP4Q8N2S1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
LTBP4Q8N2S1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
LTBP4Q8N2S1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
LTBP4Q8N2S1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.67■■■□□ 2.66
LTBP4Q8N2S1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC31.67■■■□□ 2.66
LTBP4Q8N2S1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.67■■■□□ 2.66
LTBP4Q8N2S1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
LTBP4Q8N2S1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
LTBP4Q8N2S1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.67■■■□□ 2.66
LTBP4Q8N2S1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
LTBP4Q8N2S1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms