Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC144652.1-201ENST00000609974 1624 ntBASIC23.17■■□□□ 1.3
RFX6Q8HWS3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RFX6Q8HWS3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 TSPY9P-201ENST00000440215 945 ntBASIC23.16■■□□□ 1.3
RFX6Q8HWS3 TSPY11P-201ENST00000442607 1045 ntBASIC23.16■■□□□ 1.3
RFX6Q8HWS3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RFX6Q8HWS3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RFX6Q8HWS3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RFX6Q8HWS3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFX6Q8HWS3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.14■■□□□ 1.3
RFX6Q8HWS3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFX6Q8HWS3 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.14■■□□□ 1.29
RFX6Q8HWS3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RFX6Q8HWS3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX6Q8HWS3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFX6Q8HWS3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX6Q8HWS3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 AC010997.5-201ENST00000609182 354 ntBASIC23.13■■□□□ 1.29
RFX6Q8HWS3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.13■■□□□ 1.29
RFX6Q8HWS3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RFX6Q8HWS3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX6Q8HWS3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RFX6Q8HWS3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.12■■□□□ 1.29
RFX6Q8HWS3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RFX6Q8HWS3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX6Q8HWS3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.12■■□□□ 1.29
RFX6Q8HWS3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFX6Q8HWS3 AL117328.2-201ENST00000624617 1940 ntBASIC23.1■■□□□ 1.29
RFX6Q8HWS3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFX6Q8HWS3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFX6Q8HWS3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.08■■□□□ 1.29
RFX6Q8HWS3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
RFX6Q8HWS3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.08■■□□□ 1.29
RFX6Q8HWS3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RFX6Q8HWS3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.08■■□□□ 1.29
RFX6Q8HWS3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.08■■□□□ 1.29
RFX6Q8HWS3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RFX6Q8HWS3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms