Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
HMGCS2P54868 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.05■■□□□ 1.76
HMGCS2P54868 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
HMGCS2P54868 DUX4L4-201ENST00000566884 1269 ntBASIC26.05■■□□□ 1.76
HMGCS2P54868 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.05■■□□□ 1.76
HMGCS2P54868 FP325331.1-202ENST00000623531 1380 ntBASIC26.05■■□□□ 1.76
HMGCS2P54868 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HMGCS2P54868 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
HMGCS2P54868 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCS2P54868 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.04■■□□□ 1.76
HMGCS2P54868 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCS2P54868 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.04■■□□□ 1.76
HMGCS2P54868 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.04■■□□□ 1.76
HMGCS2P54868 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.04■■□□□ 1.76
HMGCS2P54868 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCS2P54868 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCS2P54868 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCS2P54868 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
HMGCS2P54868 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
HMGCS2P54868 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
HMGCS2P54868 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.04■■□□□ 1.76
HMGCS2P54868 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
HMGCS2P54868 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCS2P54868 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.03■■□□□ 1.76
HMGCS2P54868 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCS2P54868 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.03■■□□□ 1.76
HMGCS2P54868 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.03■■□□□ 1.76
HMGCS2P54868 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
HMGCS2P54868 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.03■■□□□ 1.76
HMGCS2P54868 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.03■■□□□ 1.76
HMGCS2P54868 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
HMGCS2P54868 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HMGCS2P54868 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.02■■□□□ 1.76
HMGCS2P54868 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
HMGCS2P54868 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.02■■□□□ 1.76
HMGCS2P54868 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.02■■□□□ 1.76
HMGCS2P54868 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.02■■□□□ 1.76
HMGCS2P54868 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 AC138932.3-201ENST00000567634 1902 ntBASIC26.02■■□□□ 1.76
HMGCS2P54868 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HMGCS2P54868 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCS2P54868 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCS2P54868 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.01■■□□□ 1.75
HMGCS2P54868 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCS2P54868 AC004911.1-201ENST00000416316 871 ntBASIC26.01■■□□□ 1.75
HMGCS2P54868 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCS2P54868 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCS2P54868 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HMGCS2P54868 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26■■□□□ 1.75
HMGCS2P54868 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
HMGCS2P54868 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26■■□□□ 1.75
HMGCS2P54868 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26■■□□□ 1.75
HMGCS2P54868 KRT18P14-201ENST00000534205 1250 ntBASIC26■■□□□ 1.75
HMGCS2P54868 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26■■□□□ 1.75
HMGCS2P54868 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
HMGCS2P54868 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26■■□□□ 1.75
HMGCS2P54868 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26■■□□□ 1.75
HMGCS2P54868 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCS2P54868 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
HMGCS2P54868 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
HMGCS2P54868 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.99■■□□□ 1.75
HMGCS2P54868 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
HMGCS2P54868 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.99■■□□□ 1.75
HMGCS2P54868 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.99■■□□□ 1.75
HMGCS2P54868 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.99■■□□□ 1.75
HMGCS2P54868 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.99■■□□□ 1.75
HMGCS2P54868 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.99■■□□□ 1.75
HMGCS2P54868 TERF1P2-201ENST00000583350 1212 ntBASIC25.99■■□□□ 1.75
HMGCS2P54868 NTF6G-201ENST00000591094 616 ntBASIC25.99■■□□□ 1.75
HMGCS2P54868 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HMGCS2P54868 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCS2P54868 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCS2P54868 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCS2P54868 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCS2P54868 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCS2P54868 AC144652.1-201ENST00000609974 1624 ntBASIC25.98■■□□□ 1.75
HMGCS2P54868 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HMGCS2P54868 LINC01529-204ENST00000636474 1715 ntBASIC25.97■■□□□ 1.75
HMGCS2P54868 LINC02228-203ENST00000641970 1355 ntBASIC25.97■■□□□ 1.75
HMGCS2P54868 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCS2P54868 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.97■■□□□ 1.75
HMGCS2P54868 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.97■■□□□ 1.75
HMGCS2P54868 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
HMGCS2P54868 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCS2P54868 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCS2P54868 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.97■■□□□ 1.75
HMGCS2P54868 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCS2P54868 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCS2P54868 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HMGCS2P54868 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms