Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MT-CO2P00403 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO2P00403 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.9■□□□□ 0.46
MT-CO2P00403 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO2P00403 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO2P00403 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
MT-CO2P00403 LINC00565-201ENST00000562710 2331 ntBASIC17.89■□□□□ 0.46
MT-CO2P00403 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO2P00403 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MT-CO2P00403 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MT-CO2P00403 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO2P00403 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-CO2P00403 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO2P00403 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-CO2P00403 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO2P00403 AC010980.1-201ENST00000587192 1142 ntBASIC17.89■□□□□ 0.45
MT-CO2P00403 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO2P00403 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO2P00403 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MT-CO2P00403 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-CO2P00403 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO2P00403 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-CO2P00403 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-CO2P00403 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MT-CO2P00403 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-CO2P00403 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.88■□□□□ 0.45
MT-CO2P00403 PVT1_1.1-201ENST00000615125 194 ntBASIC17.88■□□□□ 0.45
MT-CO2P00403 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
MT-CO2P00403 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MT-CO2P00403 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-CO2P00403 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-CO2P00403 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO2P00403 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MT-CO2P00403 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO2P00403 ALDH1A3-203ENST00000557963 1670 ntBASIC17.87■□□□□ 0.45
MT-CO2P00403 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-CO2P00403 AC092068.2-201ENST00000590491 1708 ntBASIC17.87■□□□□ 0.45
MT-CO2P00403 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-CO2P00403 EP400NL-214ENST00000641289 2402 ntBASIC17.87■□□□□ 0.45
MT-CO2P00403 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO2P00403 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-CO2P00403 THA1P-201ENST00000590384 1145 ntBASIC17.87■□□□□ 0.45
MT-CO2P00403 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO2P00403 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.87■□□□□ 0.45
MT-CO2P00403 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MT-CO2P00403 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-CO2P00403 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO2P00403 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-CO2P00403 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MT-CO2P00403 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.86■□□□□ 0.45
MT-CO2P00403 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 KRT18P24-201ENST00000344739 1156 ntBASIC17.86■□□□□ 0.45
MT-CO2P00403 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
MT-CO2P00403 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-CO2P00403 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-CO2P00403 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MT-CO2P00403 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MT-CO2P00403 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MT-CO2P00403 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MT-CO2P00403 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.86■□□□□ 0.45
MT-CO2P00403 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MT-CO2P00403 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO2P00403 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO2P00403 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO2P00403 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO2P00403 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.85■□□□□ 0.45
MT-CO2P00403 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO2P00403 DUSP8P3-201ENST00000399571 1760 ntBASIC17.85■□□□□ 0.45
MT-CO2P00403 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO2P00403 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.85■□□□□ 0.45
MT-CO2P00403 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO2P00403 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.85■□□□□ 0.45
MT-CO2P00403 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
MT-CO2P00403 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
MT-CO2P00403 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO2P00403 LINC00526-201ENST00000581067 1875 ntBASIC17.84■□□□□ 0.45
MT-CO2P00403 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO2P00403 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO2P00403 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO2P00403 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO2P00403 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO2P00403 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.84■□□□□ 0.45
MT-CO2P00403 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MT-CO2P00403 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MT-CO2P00403 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms