Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
SNAI2O43623 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SNAI2O43623 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SNAI2O43623 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SNAI2O43623 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNAI2O43623 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SNAI2O43623 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SNAI2O43623 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SNAI2O43623 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.57■□□□□ 0.24
SNAI2O43623 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.57■□□□□ 0.24
SNAI2O43623 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.57■□□□□ 0.24
SNAI2O43623 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SNAI2O43623 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.57■□□□□ 0.24
SNAI2O43623 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SNAI2O43623 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNAI2O43623 AC137767.1-201ENST00000602918 1920 ntBASIC16.57■□□□□ 0.24
SNAI2O43623 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.56■□□□□ 0.24
SNAI2O43623 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.56■□□□□ 0.24
SNAI2O43623 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.56■□□□□ 0.24
SNAI2O43623 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.56■□□□□ 0.24
SNAI2O43623 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SNAI2O43623 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.56■□□□□ 0.24
SNAI2O43623 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNAI2O43623 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SNAI2O43623 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SNAI2O43623 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.55■□□□□ 0.24
SNAI2O43623 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 AC133552.2-201ENST00000619106 1032 ntBASIC16.55■□□□□ 0.24
SNAI2O43623 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.55■□□□□ 0.24
SNAI2O43623 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SNAI2O43623 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNAI2O43623 ESRRAP2-201ENST00000418437 1549 ntBASIC16.55■□□□□ 0.24
SNAI2O43623 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 ALDH1A3-203ENST00000557963 1670 ntBASIC16.54■□□□□ 0.24
SNAI2O43623 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.54■□□□□ 0.24
SNAI2O43623 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.54■□□□□ 0.24
SNAI2O43623 MIR7108-201ENST00000614319 87 ntBASIC16.54■□□□□ 0.24
SNAI2O43623 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.54■□□□□ 0.24
SNAI2O43623 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SNAI2O43623 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNAI2O43623 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SNAI2O43623 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNAI2O43623 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNAI2O43623 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNAI2O43623 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.53■□□□□ 0.24
SNAI2O43623 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNAI2O43623 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
SNAI2O43623 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNAI2O43623 AC087393.1-201ENST00000582896 145 ntBASIC16.53■□□□□ 0.24
SNAI2O43623 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.53■□□□□ 0.24
SNAI2O43623 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNAI2O43623 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms