Protein–RNA interactions for Protein: Q9UK45

LSM7, U6 snRNA-associated Sm-like protein LSm7, humanhuman

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7Q9UK45 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.19■■□□□ 1.3
LSM7Q9UK45 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.19■■□□□ 1.3
LSM7Q9UK45 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.19■■□□□ 1.3
LSM7Q9UK45 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.19■■□□□ 1.3
LSM7Q9UK45 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.19■■□□□ 1.3
LSM7Q9UK45 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
LSM7Q9UK45 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 AC144652.1-201ENST00000609974 1624 ntBASIC23.19■■□□□ 1.3
LSM7Q9UK45 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LSM7Q9UK45 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LSM7Q9UK45 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LSM7Q9UK45 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LSM7Q9UK45 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LSM7Q9UK45 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LSM7Q9UK45 AC099791.1-201ENST00000416440 715 ntBASIC23.18■■□□□ 1.3
LSM7Q9UK45 BX842568.3-201ENST00000418104 571 ntBASIC23.18■■□□□ 1.3
LSM7Q9UK45 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.18■■□□□ 1.3
LSM7Q9UK45 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.18■■□□□ 1.3
LSM7Q9UK45 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LSM7Q9UK45 DUX4L4-201ENST00000566884 1269 ntBASIC23.18■■□□□ 1.3
LSM7Q9UK45 AC233992.3-201ENST00000607491 485 ntBASIC23.18■■□□□ 1.3
LSM7Q9UK45 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LSM7Q9UK45 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LSM7Q9UK45 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LSM7Q9UK45 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.17■■□□□ 1.3
LSM7Q9UK45 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.17■■□□□ 1.3
LSM7Q9UK45 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.17■■□□□ 1.3
LSM7Q9UK45 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
LSM7Q9UK45 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
LSM7Q9UK45 AC004812.2-201ENST00000611079 2094 ntBASIC23.17■■□□□ 1.3
LSM7Q9UK45 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.16■■□□□ 1.3
LSM7Q9UK45 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LSM7Q9UK45 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
LSM7Q9UK45 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LSM7Q9UK45 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LSM7Q9UK45 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LSM7Q9UK45 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.16■■□□□ 1.3
LSM7Q9UK45 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LSM7Q9UK45 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.16■■□□□ 1.3
LSM7Q9UK45 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LSM7Q9UK45 LINC01529-204ENST00000636474 1715 ntBASIC23.16■■□□□ 1.3
LSM7Q9UK45 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LSM7Q9UK45 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.15■■□□□ 1.3
LSM7Q9UK45 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
LSM7Q9UK45 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LSM7Q9UK45 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LSM7Q9UK45 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LSM7Q9UK45 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LSM7Q9UK45 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LSM7Q9UK45 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.14■■□□□ 1.3
LSM7Q9UK45 AC133637.1-201ENST00000624115 1537 ntBASIC23.14■■□□□ 1.3
LSM7Q9UK45 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.14■■□□□ 1.29
LSM7Q9UK45 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.14■■□□□ 1.29
LSM7Q9UK45 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.14■■□□□ 1.29
LSM7Q9UK45 AL499627.2-201ENST00000606283 725 ntBASIC23.14■■□□□ 1.29
LSM7Q9UK45 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LSM7Q9UK45 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
LSM7Q9UK45 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.13■■□□□ 1.29
LSM7Q9UK45 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.13■■□□□ 1.29
LSM7Q9UK45 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.13■■□□□ 1.29
LSM7Q9UK45 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.13■■□□□ 1.29
LSM7Q9UK45 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LSM7Q9UK45 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
LSM7Q9UK45 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.12■■□□□ 1.29
LSM7Q9UK45 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.12■■□□□ 1.29
LSM7Q9UK45 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.12■■□□□ 1.29
LSM7Q9UK45 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.12■■□□□ 1.29
LSM7Q9UK45 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LSM7Q9UK45 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.11■■□□□ 1.29
LSM7Q9UK45 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.11■■□□□ 1.29
LSM7Q9UK45 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.11■■□□□ 1.29
LSM7Q9UK45 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LSM7Q9UK45 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.11■■□□□ 1.29
LSM7Q9UK45 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LSM7Q9UK45 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LSM7Q9UK45 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LSM7Q9UK45 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
LSM7Q9UK45 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LSM7Q9UK45 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
LSM7Q9UK45 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LSM7Q9UK45 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.1■■□□□ 1.29
LSM7Q9UK45 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.1■■□□□ 1.29
LSM7Q9UK45 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
LSM7Q9UK45 AC126544.1-201ENST00000580842 1059 ntBASIC23.1■■□□□ 1.29
LSM7Q9UK45 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms