Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.42■□□□□ 0.54
TMEM56Q96MV1 AC131274.2-201ENST00000580697 1507 ntBASIC18.42■□□□□ 0.54
TMEM56Q96MV1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM56Q96MV1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM56Q96MV1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM56Q96MV1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.42■□□□□ 0.54
TMEM56Q96MV1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM56Q96MV1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM56Q96MV1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM56Q96MV1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM56Q96MV1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.41■□□□□ 0.54
TMEM56Q96MV1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM56Q96MV1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 AC007375.3-201ENST00000600936 2314 ntBASIC18.4■□□□□ 0.54
TMEM56Q96MV1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.4■□□□□ 0.54
TMEM56Q96MV1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TMEM56Q96MV1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.39■□□□□ 0.54
TMEM56Q96MV1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
TMEM56Q96MV1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 RARRES2P2-201ENST00000394842 485 ntBASIC18.39■□□□□ 0.53
TMEM56Q96MV1 SPCS2P3-201ENST00000500401 656 ntBASIC18.39■□□□□ 0.53
TMEM56Q96MV1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TMEM56Q96MV1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 DUX4L9-201ENST00000449051 1259 ntBASIC18.38■□□□□ 0.53
TMEM56Q96MV1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM56Q96MV1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 AC011551.1-201ENST00000614101 683 ntBASIC18.37■□□□□ 0.53
TMEM56Q96MV1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.37■□□□□ 0.53
TMEM56Q96MV1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 AC079630.1-202ENST00000618127 1840 ntBASIC18.36■□□□□ 0.53
TMEM56Q96MV1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TMEM56Q96MV1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms