Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SH3TC1Q8TE82 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SH3TC1Q8TE82 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 FP325331.1-202ENST00000623531 1380 ntBASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SH3TC1Q8TE82 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SH3TC1Q8TE82 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
SH3TC1Q8TE82 IGHV3-19-201ENST00000521488 291 ntBASIC28.08■■■□□ 2.09
SH3TC1Q8TE82 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 DUX4L4-201ENST00000566884 1269 ntBASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.07■■■□□ 2.08
SH3TC1Q8TE82 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
SH3TC1Q8TE82 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
SH3TC1Q8TE82 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC28.05■■■□□ 2.08
SH3TC1Q8TE82 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.05■■■□□ 2.08
SH3TC1Q8TE82 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.05■■■□□ 2.08
SH3TC1Q8TE82 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SH3TC1Q8TE82 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SH3TC1Q8TE82 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 YBX1P1-201ENST00000445822 960 ntBASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.04■■■□□ 2.08
SH3TC1Q8TE82 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 AL139125.2-201ENST00000623134 1869 ntBASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 OR2I1P-207ENST00000453522 948 ntBASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 AC010525.1-201ENST00000585559 441 ntBASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SH3TC1Q8TE82 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.02■■■□□ 2.08
SH3TC1Q8TE82 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
SH3TC1Q8TE82 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SH3TC1Q8TE82 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SH3TC1Q8TE82 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SH3TC1Q8TE82 AL031602.1-201ENST00000633169 911 ntBASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms