Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.39■□□□□ 0.05
ALMS1Q8TCU4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 AC142086.2-201ENST00000569753 217 ntBASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 AC098934.4-201ENST00000564127 592 ntBASIC15.38■□□□□ 0.05
ALMS1Q8TCU4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 AC141586.4-201ENST00000624558 1573 ntBASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ALMS1Q8TCU4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 GPX1P1-201ENST00000388829 606 ntBASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 AC093827.2-201ENST00000512654 315 ntBASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 SLC7A5P2-201ENST00000553010 536 ntBASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.36■□□□□ 0.05
ALMS1Q8TCU4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 AC011767.1-201ENST00000617410 1153 ntBASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ALMS1Q8TCU4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 MFSD11-216ENST00000590393 1141 ntBASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
ALMS1Q8TCU4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC15.33■□□□□ 0.05
ALMS1Q8TCU4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ALMS1Q8TCU4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.33■□□□□ 0.05
ALMS1Q8TCU4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.33■□□□□ 0.05
ALMS1Q8TCU4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.33■□□□□ 0.05
ALMS1Q8TCU4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.33■□□□□ 0.05
ALMS1Q8TCU4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 CD99P1-205ENST00000527459 561 ntBASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.33■□□□□ 0.04
ALMS1Q8TCU4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms