Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 OR2I1P-207ENST00000453522 948 ntBASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
KRT28Q7Z3Y7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 GXYLT1P5-201ENST00000614548 1189 ntBASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
KRT28Q7Z3Y7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 CDCA4P2-201ENST00000441182 718 ntBASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
KRT28Q7Z3Y7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
KRT28Q7Z3Y7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
KRT28Q7Z3Y7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.78■■■□□ 2.52
KRT28Q7Z3Y7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
KRT28Q7Z3Y7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
KRT28Q7Z3Y7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
KRT28Q7Z3Y7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.77■■■□□ 2.52
KRT28Q7Z3Y7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
KRT28Q7Z3Y7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
KRT28Q7Z3Y7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
KRT28Q7Z3Y7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.76■■■□□ 2.51
KRT28Q7Z3Y7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.76■■■□□ 2.51
KRT28Q7Z3Y7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 AC073111.5-205ENST00000641717 521 ntBASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 AC105233.4-201ENST00000642045 216 ntBASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
KRT28Q7Z3Y7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 AP005435.1-201ENST00000529293 1178 ntBASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
KRT28Q7Z3Y7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
KRT28Q7Z3Y7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.73■■■□□ 2.51
KRT28Q7Z3Y7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.73■■■□□ 2.51
KRT28Q7Z3Y7 DUSP8P4-201ENST00000399538 1761 ntBASIC30.73■■■□□ 2.51
KRT28Q7Z3Y7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
KRT28Q7Z3Y7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
KRT28Q7Z3Y7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
KRT28Q7Z3Y7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
KRT28Q7Z3Y7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.7■■■□□ 2.51
KRT28Q7Z3Y7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
KRT28Q7Z3Y7 AC137761.2-201ENST00000561729 223 ntBASIC30.7■■■□□ 2.51
KRT28Q7Z3Y7 AC145350.3-201ENST00000569033 163 ntBASIC30.7■■■□□ 2.51
KRT28Q7Z3Y7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
KRT28Q7Z3Y7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
KRT28Q7Z3Y7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
KRT28Q7Z3Y7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
KRT28Q7Z3Y7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
KRT28Q7Z3Y7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms