Protein–RNA interactions for Protein: P38316

ATG12, Ubiquitin-like protein ATG12, yeast

Predictions only

Length 186 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	P38316	YDR246W-A	YDR246W-A	201 nt		4.26	□□□□□ -1.73
ATG12	P38316	tQ(UUG)C	tQ(UUG)C	72 nt		4.26	□□□□□ -1.73
ATG12	P38316	tQ(UUG)D1	tQ(UUG)D1	72 nt		4.26	□□□□□ -1.73
ATG12	P38316	tQ(UUG)D2	tQ(UUG)D2	72 nt		4.26	□□□□□ -1.73
ATG12	P38316	tQ(UUG)D3	tQ(UUG)D3	72 nt		4.26	□□□□□ -1.73
ATG12	P38316	tQ(UUG)E1	tQ(UUG)E1	72 nt		4.26	□□□□□ -1.73
ATG12	P38316	tQ(UUG)H	tQ(UUG)H	72 nt		4.26	□□□□□ -1.73
ATG12	P38316	tQ(UUG)L	tQ(UUG)L	72 nt		4.26	□□□□□ -1.73
ATG12	P38316	YIL028W	YIL028W	399 nt		4.26	□□□□□ -1.73
ATG12	P38316	YJL218W	YJL218W	591 nt		4.26	□□□□□ -1.73
ATG12	P38316	THI11	YJR156C	1023 nt		4.26	□□□□□ -1.73
ATG12	P38316	YKR104W	YKR104W	921 nt		4.26	□□□□□ -1.73
ATG12	P38316	PML1	YLR016C	615 nt		4.26	□□□□□ -1.73
ATG12	P38316	SMA1	YPL027W	738 nt		4.26	□□□□□ -1.73
ATG12	P38316	PSE1	YMR308C	3270 nt		4.26	□□□□□ -1.73
ATG12	P38316	KIC1	YHR102W	3243 nt		4.26	□□□□□ -1.73
ATG12	P38316	TOS3	YGL179C	1683 nt		4.26	□□□□□ -1.73
ATG12	P38316	snR7-L	snR7-L	214 nt		4.25	□□□□□ -1.73
ATG12	P38316	TFB3	YDR460W	966 nt		4.25	□□□□□ -1.73
ATG12	P38316	BUD16	YEL029C	939 nt		4.25	□□□□□ -1.73
ATG12	P38316	CDC12	YHR107C	1224 nt		4.25	□□□□□ -1.73
ATG12	P38316	YLR346C	YLR346C	306 nt		4.25	□□□□□ -1.73
ATG12	P38316	YNL067W-A	YNL067W-A	147 nt		4.25	□□□□□ -1.73
ATG12	P38316	YOR131C	YOR131C	657 nt		4.25	□□□□□ -1.73
ATG12	P38316	PBN1	YCL052C	1251 nt		4.25	□□□□□ -1.73
ATG12	P38316	KRE29	YER038C	1395 nt		4.25	□□□□□ -1.73
ATG12	P38316	CWH43	YCR017C	2862 nt		4.24	□□□□□ -1.73
ATG12	P38316	RPN5	YDL147W	1338 nt		4.24	□□□□□ -1.73
ATG12	P38316	RFT1	YBL020W	1725 nt		4.24	□□□□□ -1.73
ATG12	P38316	PTC1	YDL006W	846 nt		4.24	□□□□□ -1.73
ATG12	P38316	ARP10	YDR106W	855 nt		4.24	□□□□□ -1.73
ATG12	P38316	ARC1	YGL105W	1131 nt		4.24	□□□□□ -1.73
ATG12	P38316	TOM20	YGR082W	552 nt		4.24	□□□□□ -1.73
ATG12	P38316	GPI12	YMR281W	915 nt		4.24	□□□□□ -1.73
ATG12	P38316	DSS4	YPR017C	432 nt		4.24	□□□□□ -1.73
ATG12	P38316	YHR177W	YHR177W	1362 nt		4.24	□□□□□ -1.73
ATG12	P38316	TOG1	YER184C	2385 nt		4.24	□□□□□ -1.73
ATG12	P38316	PMC1	YGL006W	3522 nt		4.24	□□□□□ -1.73
ATG12	P38316	VHS2	YIL135C	1311 nt		4.23	□□□□□ -1.73
ATG12	P38316	AAD6	YFL056C	639 nt		4.23	□□□□□ -1.73
ATG12	P38316	SEC72	YLR292C	582 nt		4.23	□□□□□ -1.73
ATG12	P38316	SUI1	YNL244C	327 nt		4.23	□□□□□ -1.73
ATG12	P38316	YPL113C	YPL113C	1191 nt		4.23	□□□□□ -1.73
ATG12	P38316	NTA1	YJR062C	1374 nt		4.23	□□□□□ -1.73
ATG12	P38316	IFM1	YOL023W	2031 nt		4.22	□□□□□ -1.73
ATG12	P38316	SVF1	YDR346C	1446 nt		4.22	□□□□□ -1.73
ATG12	P38316	IRC22	YEL001C	678 nt		4.22	□□□□□ -1.73
ATG12	P38316	HPM1	YIL110W	1134 nt		4.22	□□□□□ -1.73
ATG12	P38316	YIL171W	YIL171W	330 nt		4.22	□□□□□ -1.73
ATG12	P38316	ROT1	YMR200W	771 nt		4.22	□□□□□ -1.73
ATG12	P38316	DCS2	YOR173W	1062 nt		4.22	□□□□□ -1.73
ATG12	P38316	EMP47	YFL048C	1338 nt		4.21	□□□□□ -1.73
ATG12	P38316	HRK1	YOR267C	2280 nt		4.21	□□□□□ -1.73
ATG12	P38316	PXA1	YPL147W	2613 nt		4.21	□□□□□ -1.74
ATG12	P38316	BLM10	YFL007W	6432 nt		4.21	□□□□□ -1.74
ATG12	P38316	KCC4	YCL024W	3114 nt		4.21	□□□□□ -1.74
ATG12	P38316	SOL4	YGR248W	768 nt		4.21	□□□□□ -1.74
ATG12	P38316	YIR043C	YIR043C	693 nt		4.21	□□□□□ -1.74
ATG12	P38316	RDN5-1	RDN5-1	121 nt		4.21	□□□□□ -1.74
ATG12	P38316	PAU17	YLL025W	375 nt		4.21	□□□□□ -1.74
ATG12	P38316	RDN5-6	RDN5-6	121 nt		4.21	□□□□□ -1.74
ATG12	P38316	YDC1	YPL087W	954 nt		4.21	□□□□□ -1.74
ATG12	P38316	TGS1	YPL157W	948 nt		4.21	□□□□□ -1.74
ATG12	P38316	VPS69	YPR087W	321 nt		4.21	□□□□□ -1.74
ATG12	P38316	GSH2	YOL049W	1476 nt		4.21	□□□□□ -1.74
ATG12	P38316	ABF1	YKL112W	2196 nt		4.21	□□□□□ -1.74
ATG12	P38316	TRF5	YNL299W	1929 nt		4.21	□□□□□ -1.74
ATG12	P38316	LAS1	YKR063C	1509 nt		4.21	□□□□□ -1.74
ATG12	P38316	RSC58	YLR033W	1509 nt		4.21	□□□□□ -1.74
ATG12	P38316	ARO80	YDR421W	2853 nt		4.2	□□□□□ -1.74
ATG12	P38316	COP1	YDL145C	3606 nt		4.2	□□□□□ -1.74
ATG12	P38316	PCA1	YBR295W	3651 nt		4.2	□□□□□ -1.74
ATG12	P38316	UBC6	YER100W	753 nt		4.2	□□□□□ -1.74
ATG12	P38316	YKL169C	YKL169C	384 nt		4.2	□□□□□ -1.74
ATG12	P38316	YBR126W-A	YBR126W-A	207 nt		4.2	□□□□□ -1.74
ATG12	P38316	BUD8	YLR353W	1812 nt		4.2	□□□□□ -1.74
ATG12	P38316	YNR065C	YNR065C	3351 nt		4.2	□□□□□ -1.74
ATG12	P38316	YBR139W	YBR139W	1527 nt		4.2	□□□□□ -1.74
ATG12	P38316	RIA1	YNL163C	3333 nt		4.2	□□□□□ -1.74
ATG12	P38316	PMT5	YDL093W	2232 nt		4.19	□□□□□ -1.74
ATG12	P38316	IBA57	YJR122W	1494 nt		4.19	□□□□□ -1.74
ATG12	P38316	SMP1	YBR182C	1359 nt		4.19	□□□□□ -1.74
ATG12	P38316	MRP4	YHL004W	1185 nt		4.19	□□□□□ -1.74
ATG12	P38316	YMR086C-A	YMR086C-A	339 nt		4.19	□□□□□ -1.74
ATG12	P38316	RPC19	YNL113W	429 nt		4.19	□□□□□ -1.74
ATG12	P38316	GIP2	YER054C	1647 nt		4.19	□□□□□ -1.74
ATG12	P38316	SEC9	YGR009C	1956 nt		4.19	□□□□□ -1.74
ATG12	P38316	ESF1	YDR365C	1887 nt		4.19	□□□□□ -1.74
ATG12	P38316	THI20	YOL055C	1656 nt		4.19	□□□□□ -1.74
ATG12	P38316	BRE4	YDL231C	3378 nt		4.19	□□□□□ -1.74
ATG12	P38316	PRP43	YGL120C	2304 nt		4.18	□□□□□ -1.74
ATG12	P38316	CAF16	YFL028C	870 nt		4.18	□□□□□ -1.74
ATG12	P38316	RPL24A	YGL031C	468 nt		4.18	□□□□□ -1.74
ATG12	P38316	YJR096W	YJR096W	849 nt		4.18	□□□□□ -1.74
ATG12	P38316	ISA1	YLL027W	753 nt		4.18	□□□□□ -1.74
ATG12	P38316	HEK2	YBL032W	1146 nt		4.18	□□□□□ -1.74
ATG12	P38316	PHA2	YNL316C	1005 nt		4.18	□□□□□ -1.74
ATG12	P38316	YOL035C	YOL035C	303 nt		4.18	□□□□□ -1.74
ATG12	P38316	HOT1	YMR172W	2160 nt		4.18	□□□□□ -1.74
ATG12	P38316	VAC7	YNL054W	3498 nt		4.18	□□□□□ -1.74

Retrieved 100 of 7,029 protein–RNA pairs in 46.6 ms