RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W MTC1P47018 478 aaKnown RBP15.84■□□□□ 0.13
YDC1YPL087W DRS1P32892 752 aaKnown RBP15.74■□□□□ 0.11
YDC1YPL087W FAP1P53971 965 aa14.46□□□□□ -0.09
YDC1YPL087W PRY3P47033 881 aa13.58□□□□□ -0.24
YDC1YPL087W BFR2Q06631 534 aaKnown RBP13.56□□□□□ -0.24
YDC1YPL087W DIP2Q12220 943 aaPredicted RBP13.46□□□□□ -0.25
YDC1YPL087W PRI1P10363 409 aa13.35□□□□□ -0.27
YDC1YPL087W AAD16Q02895 342 aa13.33□□□□□ -0.28
YDC1YPL087W AVT3P36062 692 aa13.18□□□□□ -0.3
YDC1YPL087W ISW2Q08773 1120 aa13.06□□□□□ -0.32
YDC1YPL087W RPG1P38249 964 aaKnown RBP12.88□□□□□ -0.35
YDC1YPL087W RSE1Q04693 1361 aaKnown RBP12.8□□□□□ -0.36
YDC1YPL087W HAA1Q12753 694 aaKnown RBP12.77□□□□□ -0.37
YDC1YPL087W YCK3P39962 524 aa12.72□□□□□ -0.37
YDC1YPL087W TFA1P36100 482 aa12.62□□□□□ -0.39
YDC1YPL087W TSR3Q12094 313 aaKnown RBP12.57□□□□□ -0.4
YDC1YPL087W RPL17AP05740 184 aaKnown RBP12.28□□□□□ -0.44
YDC1YPL087W RPL17BP46990 184 aaKnown RBP12.28□□□□□ -0.44
YDC1YPL087W REB1P21538 810 aa12.21□□□□□ -0.45
YDC1YPL087W MRPL32P25348 183 aa12.15□□□□□ -0.46
YDC1YPL087W YGL015CP33199 130 aa11.76□□□□□ -0.53
YDC1YPL087W SPT21P35209 758 aa11.75□□□□□ -0.53
YDC1YPL087W RIM101P33400 625 aa11.59□□□□□ -0.55
YDC1YPL087W CDC27P38042 758 aa11.4□□□□□ -0.58
YDC1YPL087W YKR023WP36119 530 aaKnown RBP11.39□□□□□ -0.59
YDC1YPL087W UBP10P53874 792 aaPredicted RBP11.21□□□□□ -0.61
YDC1YPL087W TFC8Q12308 588 aa11.21□□□□□ -0.61
YDC1YPL087W YIL055CP40523 627 aaKnown RBP11.19□□□□□ -0.62
YDC1YPL087W HOP09932 586 aa11.17□□□□□ -0.62
YDC1YPL087W OXP1P28273 1286 aa11.16□□□□□ -0.62
YDC1YPL087W MAP2P38174 421 aaKnown RBP11.11□□□□□ -0.63
YDC1YPL087W PTP3P40048 928 aa11.09□□□□□ -0.63
YDC1YPL087W DCD1P06773 312 aa11.05□□□□□ -0.64
YDC1YPL087W SSP1P38871 571 aa11.04□□□□□ -0.64
YDC1YPL087W YAH1Q12184 172 aaKnown RBP11.04□□□□□ -0.64
YDC1YPL087W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
YDC1YPL087W RSM7P47150 247 aa10.94□□□□□ -0.66
YDC1YPL087W BUD31P25337 157 aaPredicted RBP10.91□□□□□ -0.66
YDC1YPL087W BCH2P36122 765 aa10.86□□□□□ -0.67
YDC1YPL087W YLR271WQ06152 274 aa10.85□□□□□ -0.67
YDC1YPL087W SCY1P53009 804 aa10.84□□□□□ -0.67
YDC1YPL087W BBC1P47068 1157 aa10.8□□□□□ -0.68
YDC1YPL087W TIF4632P39936 914 aaKnown RBP10.78□□□□□ -0.68
YDC1YPL087W RQC2Q12532 1038 aaKnown RBP10.77□□□□□ -0.69
YDC1YPL087W SLX5P32828 619 aaKnown RBP10.75□□□□□ -0.69
YDC1YPL087W AI2P03876 854 aa10.74□□□□□ -0.69
YDC1YPL087W TGL3P40308 642 aa10.71□□□□□ -0.69
YDC1YPL087W MGA2P40578 1113 aa10.7□□□□□ -0.7
YDC1YPL087W EPS1P40557 701 aa10.69□□□□□ -0.7
YDC1YPL087W BDF1P35817 686 aa10.61□□□□□ -0.71
YDC1YPL087W PSD2P53037 1138 aaKnown RBP10.61□□□□□ -0.71
YDC1YPL087W UBP9P39967 754 aa10.53□□□□□ -0.72
YDC1YPL087W CST9Q06032 482 aa10.49□□□□□ -0.73
YDC1YPL087W MRM1P25270 412 aa10.4□□□□□ -0.74
YDC1YPL087W SIS1P25294 352 aaKnown RBP10.37□□□□□ -0.75
YDC1YPL087W RTG3P38165 486 aa10.32□□□□□ -0.76
YDC1YPL087W DMA1P38823 416 aa10.29□□□□□ -0.76
YDC1YPL087W NSR1P27476 414 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
YDC1YPL087W MST1P07236 462 aa10.2□□□□□ -0.78
YDC1YPL087W YAP5P40574 245 aa10.18□□□□□ -0.78
YDC1YPL087W YOR238WQ08634 303 aa10.18□□□□□ -0.78
YDC1YPL087W YMR1P47147 688 aaKnown RBP RIP-Chip data10.15□□□□□ -0.78not detected
YDC1YPL087W RCR1P38212 213 aa10.12□□□□□ -0.79
YDC1YPL087W RAM2P29703 316 aa10.11□□□□□ -0.79
YDC1YPL087W VPS29P38759 282 aa10.11□□□□□ -0.79
YDC1YPL087W MAK11P20484 414 aaKnown RBP10.07□□□□□ -0.8
YDC1YPL087W YBL029C-AQ3E756 94 aa10.07□□□□□ -0.8
YDC1YPL087W DBP1P24784 617 aaKnown RBP10.03□□□□□ -0.8
YDC1YPL087W STS1P38637 319 aa9.96□□□□□ -0.82
YDC1YPL087W GTT3P39996 337 aa9.96□□□□□ -0.82
YDC1YPL087W VNX1P42839 908 aa9.96□□□□□ -0.82
YDC1YPL087W YFR006WP43590 535 aa9.95□□□□□ -0.82
YDC1YPL087W SET1P38827 1080 aaKnown RBP9.93□□□□□ -0.82
YDC1YPL087W IFH1P39520 1085 aa9.92□□□□□ -0.82
YDC1YPL087W PIB1Q06651 286 aa9.92□□□□□ -0.82
YDC1YPL087W NOP53Q12080 455 aaKnown RBP9.91□□□□□ -0.82
YDC1YPL087W MIF2P35201 549 aa9.9□□□□□ -0.82
YDC1YPL087W SPP1Q03012 353 aa9.9□□□□□ -0.82
YDC1YPL087W COQ8P27697 501 aa9.89□□□□□ -0.83
YDC1YPL087W WSC3Q12215 556 aa9.87□□□□□ -0.83
YDC1YPL087W VMA1P17255 1071 aaKnown RBP9.86□□□□□ -0.83
YDC1YPL087W SAS10Q12136 610 aaPredicted RBP9.83□□□□□ -0.84
YDC1YPL087W TIF11P38912 153 aaKnown RBP9.78□□□□□ -0.84
YDC1YPL087W SAM3Q08986 587 aa9.78□□□□□ -0.84
YDC1YPL087W ABP1P15891 592 aaKnown RBP9.76□□□□□ -0.85
YDC1YPL087W PTC3P34221 468 aaKnown RBP9.76□□□□□ -0.85
YDC1YPL087W EDS1P38073 919 aa9.76□□□□□ -0.85
YDC1YPL087W YPR148CQ06523 435 aa9.75□□□□□ -0.85
YDC1YPL087W MSB4Q12317 492 aa9.75□□□□□ -0.85
YDC1YPL087W GRE2Q12068 342 aaKnown RBP9.73□□□□□ -0.85
YDC1YPL087W CKB1P43639 278 aa9.72□□□□□ -0.85
YDC1YPL087W ATH1P48016 1211 aa9.72□□□□□ -0.85
YDC1YPL087W GYP5Q12344 894 aa9.71□□□□□ -0.86
YDC1YPL087W YOL036WQ08206 761 aa9.7□□□□□ -0.86
YDC1YPL087W GUT1P32190 709 aa9.69□□□□□ -0.86
YDC1YPL087W EAP1P36041 632 aaKnown RBP9.69□□□□□ -0.86
YDC1YPL087W VPS70P47161 811 aa9.69□□□□□ -0.86
YDC1YPL087W FKH1P40466 484 aa9.68□□□□□ -0.86
YDC1YPL087W AIR2Q12476 344 aaKnown RBP9.68□□□□□ -0.86
YDC1YPL087W YJL171CP46992 396 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms