RNA–Protein interactions for RNA: YBL020W

RFT1, Transcript of Membrane protein required for translocation of Man5GlcNac2-PP-Dol, yeastyeast

Gene RFT1, Length 1,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFT1YBL020W MTC1P47018 478 aaKnown RBP11.52□□□□□ -0.56
RFT1YBL020W DRS1P32892 752 aaKnown RBP11.18□□□□□ -0.62
RFT1YBL020W FAP1P53971 965 aa9.82□□□□□ -0.84
RFT1YBL020W DIP2Q12220 943 aaPredicted RBP9.65□□□□□ -0.87
RFT1YBL020W BFR2Q06631 534 aaKnown RBP9.51□□□□□ -0.89
RFT1YBL020W PRI1P10363 409 aa9.46□□□□□ -0.89
RFT1YBL020W ISW2Q08773 1120 aa9.45□□□□□ -0.9
RFT1YBL020W AVT3P36062 692 aa9.44□□□□□ -0.9
RFT1YBL020W AAD16Q02895 342 aa9.35□□□□□ -0.91
RFT1YBL020W RPG1P38249 964 aaKnown RBP9.32□□□□□ -0.92
RFT1YBL020W PRY3P47033 881 aa9.22□□□□□ -0.93
RFT1YBL020W RSE1Q04693 1361 aaKnown RBP9.21□□□□□ -0.93
RFT1YBL020W TSR3Q12094 313 aaKnown RBP8.94□□□□□ -0.98
RFT1YBL020W RPL17AP05740 184 aaKnown RBP8.88□□□□□ -0.99
RFT1YBL020W RPL17BP46990 184 aaKnown RBP8.88□□□□□ -0.99
RFT1YBL020W TFA1P36100 482 aa8.85□□□□□ -0.99
RFT1YBL020W REB1P21538 810 aa8.8□□□□□ -1
RFT1YBL020W YCK3P39962 524 aa8.73□□□□□ -1.01
RFT1YBL020W HAA1Q12753 694 aaKnown RBP8.71□□□□□ -1.01
RFT1YBL020W MRPL32P25348 183 aa8.61□□□□□ -1.03
RFT1YBL020W RQC2Q12532 1038 aaKnown RBP8.57□□□□□ -1.04
RFT1YBL020W SPT21P35209 758 aa8.55□□□□□ -1.04
RFT1YBL020W TAF7Q05021 590 aa8.51□□□□□ -1.05
RFT1YBL020W RIM101P33400 625 aa8.35□□□□□ -1.07
RFT1YBL020W YKR023WP36119 530 aaKnown RBP8.34□□□□□ -1.07
RFT1YBL020W CDC27P38042 758 aa8.25□□□□□ -1.09
RFT1YBL020W TFC8Q12308 588 aa8.18□□□□□ -1.1
RFT1YBL020W HOP09932 586 aa8.15□□□□□ -1.1
RFT1YBL020W YGL015CP33199 130 aa8.15□□□□□ -1.11
RFT1YBL020W DCD1P06773 312 aa8.09□□□□□ -1.11
RFT1YBL020W OXP1P28273 1286 aa8.07□□□□□ -1.12
RFT1YBL020W UBP10P53874 792 aaPredicted RBP7.99□□□□□ -1.13
RFT1YBL020W YIL055CP40523 627 aaKnown RBP7.95□□□□□ -1.14
RFT1YBL020W MAP2P38174 421 aaKnown RBP7.94□□□□□ -1.14
RFT1YBL020W BCH2P36122 765 aa7.92□□□□□ -1.14
RFT1YBL020W PTP3P40048 928 aa7.92□□□□□ -1.14
RFT1YBL020W YAH1Q12184 172 aaKnown RBP7.87□□□□□ -1.15
RFT1YBL020W SCY1P53009 804 aa7.86□□□□□ -1.15
RFT1YBL020W RSM7P47150 247 aa7.84□□□□□ -1.15
RFT1YBL020W BUD31P25337 157 aaPredicted RBP7.81□□□□□ -1.16
RFT1YBL020W SSP1P38871 571 aa7.81□□□□□ -1.16
RFT1YBL020W YLR271WQ06152 274 aa7.79□□□□□ -1.16
RFT1YBL020W EPS1P40557 701 aa7.76□□□□□ -1.17
RFT1YBL020W SLX5P32828 619 aaKnown RBP7.75□□□□□ -1.17
RFT1YBL020W AI2P03876 854 aa7.73□□□□□ -1.17
RFT1YBL020W DMA1P38823 416 aa7.73□□□□□ -1.17
RFT1YBL020W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
RFT1YBL020W BDF1P35817 686 aa7.72□□□□□ -1.17
RFT1YBL020W BBC1P47068 1157 aa7.72□□□□□ -1.17
RFT1YBL020W LEO1P38439 464 aa7.68□□□□□ -1.18
RFT1YBL020W TIF4632P39936 914 aaKnown RBP7.66□□□□□ -1.18
RFT1YBL020W PSD2P53037 1138 aaKnown RBP7.64□□□□□ -1.19
RFT1YBL020W TGL3P40308 642 aa7.62□□□□□ -1.19
RFT1YBL020W MGA2P40578 1113 aa7.58□□□□□ -1.2
RFT1YBL020W CST9Q06032 482 aa7.52□□□□□ -1.2
RFT1YBL020W MRM1P25270 412 aa7.47□□□□□ -1.21
RFT1YBL020W NSR1P27476 414 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
RFT1YBL020W YAP5P40574 245 aa7.37□□□□□ -1.23
RFT1YBL020W MST1P07236 462 aa7.36□□□□□ -1.23
RFT1YBL020W RTG3P38165 486 aa7.35□□□□□ -1.23
RFT1YBL020W YOR238WQ08634 303 aa7.35□□□□□ -1.23
RFT1YBL020W VPS29P38759 282 aa7.31□□□□□ -1.24
RFT1YBL020W RCR1P38212 213 aa7.3□□□□□ -1.24
RFT1YBL020W YMR1P47147 688 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
RFT1YBL020W SIS1P25294 352 aaKnown RBP7.25□□□□□ -1.25
RFT1YBL020W UBP9P39967 754 aa7.25□□□□□ -1.25
RFT1YBL020W DBP1P24784 617 aaKnown RBP7.22□□□□□ -1.25
RFT1YBL020W RAM2P29703 316 aa7.21□□□□□ -1.25
RFT1YBL020W STS1P38637 319 aa7.21□□□□□ -1.25
RFT1YBL020W PIB1Q06651 286 aa7.2□□□□□ -1.26
RFT1YBL020W YFR006WP43590 535 aa7.18□□□□□ -1.26
RFT1YBL020W NAP1P25293 417 aaKnown RBP7.18□□□□□ -1.26
RFT1YBL020W URN1Q06525 465 aaKnown RBP7.18□□□□□ -1.26
RFT1YBL020W GTT3P39996 337 aa7.17□□□□□ -1.26
RFT1YBL020W LEU3P08638 886 aa7.16□□□□□ -1.26
RFT1YBL020W IFH1P39520 1085 aa7.16□□□□□ -1.26
RFT1YBL020W IOC4Q04213 475 aa7.16□□□□□ -1.26
RFT1YBL020W MAK11P20484 414 aaKnown RBP7.15□□□□□ -1.26
RFT1YBL020W YBL029C-AQ3E756 94 aa7.13□□□□□ -1.27
RFT1YBL020W VMA1P17255 1071 aaKnown RBP7.12□□□□□ -1.27
RFT1YBL020W ABP1P15891 592 aaKnown RBP7.11□□□□□ -1.27
RFT1YBL020W VNX1P42839 908 aa7.1□□□□□ -1.27
RFT1YBL020W WSC3Q12215 556 aa7.1□□□□□ -1.27
RFT1YBL020W SAM3Q08986 587 aa7.08□□□□□ -1.28
RFT1YBL020W DMA2P53924 522 aa7.07□□□□□ -1.28
RFT1YBL020W MSB4Q12317 492 aa7.05□□□□□ -1.28
RFT1YBL020W COQ8P27697 501 aa7.04□□□□□ -1.28
RFT1YBL020W MIF2P35201 549 aa7.04□□□□□ -1.28
RFT1YBL020W YOL036WQ08206 761 aa7.04□□□□□ -1.28
RFT1YBL020W SPP1Q03012 353 aa7.03□□□□□ -1.28
RFT1YBL020W EDS1P38073 919 aa7.02□□□□□ -1.29
RFT1YBL020W TIF11P38912 153 aaKnown RBP7.02□□□□□ -1.29
RFT1YBL020W ORC1P54784 914 aaPredicted RBP7.02□□□□□ -1.29
RFT1YBL020W AIM44Q99299 758 aa7.02□□□□□ -1.29
RFT1YBL020W NOP53Q12080 455 aaKnown RBP7.01□□□□□ -1.29
RFT1YBL020W SET4P42948 560 aa7□□□□□ -1.29
RFT1YBL020W SAS10Q12136 610 aaPredicted RBP6.99□□□□□ -1.29
RFT1YBL020W PTC3P34221 468 aaKnown RBP6.98□□□□□ -1.29
RFT1YBL020W EAP1P36041 632 aaKnown RBP6.98□□□□□ -1.29
RFT1YBL020W GYP5Q12344 894 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms