Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
C4BPAP04003 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
C4BPAP04003 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
C4BPAP04003 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
C4BPAP04003 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
C4BPAP04003 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
C4BPAP04003 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.17■■□□□ 1.46
C4BPAP04003 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
C4BPAP04003 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
C4BPAP04003 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
C4BPAP04003 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.17■■□□□ 1.46
C4BPAP04003 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
C4BPAP04003 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
C4BPAP04003 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.17■■□□□ 1.46
C4BPAP04003 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
C4BPAP04003 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.16■■□□□ 1.46
C4BPAP04003 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.16■■□□□ 1.46
C4BPAP04003 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
C4BPAP04003 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
C4BPAP04003 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
C4BPAP04003 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.16■■□□□ 1.46
C4BPAP04003 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.15■■□□□ 1.46
C4BPAP04003 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 DUX4L4-201ENST00000566884 1269 ntBASIC24.15■■□□□ 1.46
C4BPAP04003 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
C4BPAP04003 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
C4BPAP04003 LINC01529-204ENST00000636474 1715 ntBASIC24.15■■□□□ 1.46
C4BPAP04003 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
C4BPAP04003 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
C4BPAP04003 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
C4BPAP04003 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
C4BPAP04003 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
C4BPAP04003 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.14■■□□□ 1.45
C4BPAP04003 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
C4BPAP04003 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
C4BPAP04003 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.14■■□□□ 1.45
C4BPAP04003 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
C4BPAP04003 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
C4BPAP04003 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.13■■□□□ 1.45
C4BPAP04003 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
C4BPAP04003 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.13■■□□□ 1.45
C4BPAP04003 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
C4BPAP04003 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
C4BPAP04003 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.13■■□□□ 1.45
C4BPAP04003 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
C4BPAP04003 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.13■■□□□ 1.45
C4BPAP04003 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
C4BPAP04003 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
C4BPAP04003 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
C4BPAP04003 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.13■■□□□ 1.45
C4BPAP04003 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
C4BPAP04003 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
C4BPAP04003 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.12■■□□□ 1.45
C4BPAP04003 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
C4BPAP04003 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
C4BPAP04003 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
C4BPAP04003 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.12■■□□□ 1.45
C4BPAP04003 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
C4BPAP04003 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.11■■□□□ 1.45
C4BPAP04003 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.11■■□□□ 1.45
C4BPAP04003 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.11■■□□□ 1.45
C4BPAP04003 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
C4BPAP04003 SRD5A1P1-201ENST00000442297 786 ntBASIC24.11■■□□□ 1.45
C4BPAP04003 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.11■■□□□ 1.45
C4BPAP04003 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.11■■□□□ 1.45
C4BPAP04003 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.11■■□□□ 1.45
C4BPAP04003 AC099791.2-201ENST00000605725 427 ntBASIC24.11■■□□□ 1.45
C4BPAP04003 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.11■■□□□ 1.45
C4BPAP04003 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
C4BPAP04003 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
C4BPAP04003 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
C4BPAP04003 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
C4BPAP04003 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
C4BPAP04003 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
C4BPAP04003 AC241377.3-202ENST00000626088 1088 ntBASIC24.1■■□□□ 1.45
C4BPAP04003 AC241585.3-202ENST00000628937 1088 ntBASIC24.1■■□□□ 1.45
C4BPAP04003 AC245100.8-202ENST00000629247 1058 ntBASIC24.1■■□□□ 1.45
C4BPAP04003 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
C4BPAP04003 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
C4BPAP04003 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
C4BPAP04003 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
C4BPAP04003 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.1■■□□□ 1.45
C4BPAP04003 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
C4BPAP04003 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
C4BPAP04003 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
C4BPAP04003 AL136116.3-201ENST00000402907 1138 ntBASIC24.09■■□□□ 1.45
C4BPAP04003 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.09■■□□□ 1.45
C4BPAP04003 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
C4BPAP04003 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
C4BPAP04003 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
C4BPAP04003 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
C4BPAP04003 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
C4BPAP04003 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 385 ms